RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ZNF713Q8N859 430 aaPredicted RBP13.68□□□□□ -0.22
CCDC60-201ENST00000327554 FBXO41Q8TF61 875 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 UIMC1Q96RL1 719 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 TBK1Q9UHD2 729 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 SH3BP1Q9Y3L3 701 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 DOT1LQ8TEK3 1739 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 TMEM110-MUSTN1A8MSY1 372 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 MED24O75448 989 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 ECEL1O95672 775 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 LMNAP02545 664 aaKnown RBP13.68□□□□□ -0.22
CCDC60-201ENST00000327554 GSTA2P09210 222 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 TNFAIP3P21580 790 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 RFC4P35249 363 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 IL9RQ01113 521 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 UBE2SQ16763 222 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 KHDC1Q4VXA5 237 aaKnown RBP13.68□□□□□ -0.22
CCDC60-201ENST00000327554 C3orf67Q6ZVT6 689 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 CFAP61Q8NHU2 1237 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 LRRC8CQ8TDW0 803 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 NRG4Q8WWG1 115 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 SPOCK2Q92563 424 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 CD101Q93033 1021 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 FGD4Q96M96 766 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 TMX4Q9H1E5 349 aaPredicted RBP13.68□□□□□ -0.22
CCDC60-201ENST00000327554 TYW1Q9NV66 732 aaKnown RBP13.68□□□□□ -0.22
CCDC60-201ENST00000327554 EURLQ9NYK6 297 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 STOML1Q9UBI4 398 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 SCOCQ9UIL1 159 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 PHTF1Q9UMS5 762 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 NAALADL1Q9UQQ1 740 aa13.68□□□□□ -0.22
CCDC60-201ENST00000327554 USP17L5A8MUK1 530 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 DCTN3O75935 186 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 COMTP21964 271 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 OCRLQ01968 901 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 DNAJC3Q13217 504 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 RCN2Q14257 317 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 TCEAL1Q15170 157 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 RFWD3Q6PCD5 774 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 RPUSD2Q8IZ73 545 aaKnown RBP13.67□□□□□ -0.22
CCDC60-201ENST00000327554 RBM41Q96IZ5 413 aaKnown RBP13.67□□□□□ -0.22
CCDC60-201ENST00000327554 DNAJC18Q9H819 358 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 SEPT11Q9NVA2 429 aaKnown RBP13.67□□□□□ -0.22
CCDC60-201ENST00000327554 DNAJC17Q9NVM6 304 aaKnown RBP13.67□□□□□ -0.22
CCDC60-201ENST00000327554 NINJ2Q9NZG7 142 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 TAF1LQ8IZX4 1826 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 CLIC2O15247 247 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 MARCH6O60337 910 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 ASMTLO95671 621 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 CLK2P49760 499 aaKnown RBP13.67□□□□□ -0.22
CCDC60-201ENST00000327554 BMT2Q1RMZ1 405 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 C4orf50Q6ZRC1 276 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 ATL2Q8NHH9 583 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 C10orf82Q8WW14 230 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 SLCO2A1Q92959 643 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 REEP2Q9BRK0 252 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 TIPINQ9BVW5 301 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 LRRC19Q9H756 370 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 SLCO1B3Q9NPD5 702 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 MTUS1Q9ULD2 1270 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 JAG2Q9Y219 1238 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 PCDHB13Q9Y5F0 798 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 ACTL7BQ9Y614 415 aa13.67□□□□□ -0.22
CCDC60-201ENST00000327554 FAM47DPA6NHR8 397 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 ATP9AO75110 1047 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 CAMTA2O94983 1202 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 ATF3P18847 181 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
CCDC60-201ENST00000327554 IVDP26440 423 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 MARK3P27448 753 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 PTPN4P29074 926 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 RASSF2P50749 326 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 SESN3P58005 492 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 KRT17Q04695 432 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 SPDYAQ5MJ70 313 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 SNX30Q5VWJ9 437 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 POTEGQ6S5H5 508 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 CPNE8Q86YQ8 564 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 EYA3Q99504 573 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 MIPEPQ99797 713 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 TFCP2L1Q9NZI6 479 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 UBAP1LF5GYI3 381 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 CDH16O75309 829 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 KCNA1Q09470 495 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 KIF22Q14807 665 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 SPTY2D1Q68D10 685 aaPredicted RBP13.66□□□□□ -0.22
CCDC60-201ENST00000327554 RNF207Q6ZRF8 634 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 RGS9BPQ6ZS82 235 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 NBPF5PQ86XG9 351 aaPredicted RBP13.66□□□□□ -0.22
CCDC60-201ENST00000327554 DZIP1Q86YF9 867 aaKnown RBP13.66□□□□□ -0.22
CCDC60-201ENST00000327554 NEDD1Q8NHV4 660 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 FAM81AQ8TBF8 368 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 SLC20A1Q8WUM9 679 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 SCG3Q8WXD2 468 aaKnown RBP13.66□□□□□ -0.22
CCDC60-201ENST00000327554 GATA6Q92908 595 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 BCAS3Q9H6U6 928 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 LNPEPQ9UIQ6 1025 aa13.66□□□□□ -0.22
CCDC60-201ENST00000327554 FRMPD2Q68DX3 1309 aaPredicted RBP13.65□□□□□ -0.22
CCDC60-201ENST00000327554 THAP12O43422 761 aa13.65□□□□□ -0.22
CCDC60-201ENST00000327554 EDF1O60869 148 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms