RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 LDHAP00338 332 aaKnown RBP11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 CD4P01730 458 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 ADRB2P07550 413 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 MCF2P10911 925 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 FGFR4P22455 802 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 MCCD1P59942 119 aaPredicted RBP11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 ENPEPQ07075 957 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 NCBP1Q09161 790 aaKnown RBP11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 NR1I3Q14994 352 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 VWA3BQ502W6 1294 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 C1orf53Q5VUE5 145 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 EEF1DP3Q658K8 133 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 SLC39A5Q6ZMH5 540 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 CBWD2Q8IUF1 395 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 CAGE1Q8TC20 777 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 CPB2Q96IY4 423 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 PDLIM2Q96JY6 352 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 TMEM106CQ9BVX2 250 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 CDT1Q9H211 546 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 AGPAT5Q9NUQ2 364 aa11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.17□□□□□ -0.62
VIPAS39-201ENST00000327028 A0A1B0GUA9 196 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 OGTO15294 1046 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 FAM189A1O60320 539 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 KRT13P13646 458 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 BFSP1Q12934 665 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 ANKRD33Q7Z3H0 272 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 APBB1IPQ7Z5R6 666 aaPredicted RBP11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 FAM228AQ86W67 206 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 DIS3LQ8TF46 1054 aaKnown RBP11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 FAM213AQ9BRX8 229 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 TCHPQ9BT92 498 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 NDST4Q9H3R1 872 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 NOC2LQ9Y3T9 749 aaKnown RBP11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 TANC1Q9C0D5 1861 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 ZNF233A6NK53 670 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 TLR3O15455 904 aaKnown RBP11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 HARSP12081 509 aaKnown RBP11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 CKBP12277 381 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 CYP24A1Q07973 514 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 CCDC173Q0VFZ6 552 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 DCAF4L1Q3SXM0 396 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 NOTUMQ6P988 496 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 SLC35C1Q96A29 364 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 CCDC51Q96ER9 411 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 MFSD14AQ96MC6 490 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
VIPAS39-201ENST00000327028 TEX33O43247 280 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 HOXA11P31270 313 aaPredicted RBP11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 DCAF17Q5H9S7 520 aaPredicted RBP11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 FBXO47Q5MNV8 452 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 ZNF618Q5T7W0 954 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 CRELD2Q6UXH1 353 aaPredicted RBP11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 RDH13Q8NBN7 331 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 TMC2Q8TDI7 906 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 C11orf49Q9H6J7 331 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 KIAA0100Q14667 2235 aaKnown RBP11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 PES1O00541 588 aaKnown RBP11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 PQBP1O60828 265 aaKnown RBP11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 RPS6KA5O75582 802 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 AFPP02771 609 aaKnown RBP11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 PBX1P40424 430 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 VAMP7P51809 220 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 KYAT1Q16773 422 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 ZBTB41Q5SVQ8 909 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 FKBP15Q5T1M5 1219 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 SLC27A1Q6PCB7 646 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 CDR2LQ86X02 465 aaPredicted RBP11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 VSTM4Q8IW00 320 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 BRSK2Q8IWQ3 736 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 TOX2Q96NM4 488 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 PPP1R9BQ96SB3 815 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 ADPGKQ9BRR6 497 aa11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 PIN4Q9Y237 131 aaKnown RBP11.15□□□□□ -0.62
VIPAS39-201ENST00000327028 RALGAPA2Q2PPJ7 1873 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 A0A1W2PQC6 194 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 ACOT2P49753 483 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 UBXN1Q04323 297 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 KCNH2Q12809 1159 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 BFSP2Q13515 415 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 PSMD6Q15008 389 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 TCERG1LQ5VWI1 586 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 USP37Q86T82 979 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 USP38Q8NB14 1042 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 ERVK-5Q9HDB9 667 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 RBAKQ9NYW8 714 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 CPSF3Q9UKF6 684 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 GPR182O15218 404 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 POU5F1Q01860 360 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 LPIN1Q14693 890 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 TRIM60Q495X7 471 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 PLEKHO2Q8TD55 490 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 ANK1P16157 1881 aa11.14□□□□□ -0.63
VIPAS39-201ENST00000327028 ITIH6Q6UXX5 1313 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 DCDC2CA8MYV0 355 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
VIPAS39-201ENST00000327028 STX10O60499 249 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms