RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 LIG1P18858 919 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 GLUD2P49448 558 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 POU5F1BQ06416 359 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 GRIK3Q13003 919 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 GIT2Q14161 759 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 PCBP1Q15365 356 aaKnown RBP eCLIP13.68□□□□□ -0.22
TPM3-204ENST00000323144 EEF1DP3Q658K8 133 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 BMP8AQ7Z5Y6 402 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 NOSTRINQ8IVI9 506 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 FBXL6Q8N531 539 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 TMEM87AQ8NBN3 555 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 CNNM3Q8NE01 707 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 MCPH1Q8NEM0 835 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 HASPINQ8TF76 798 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 MFSD14AQ96MC6 490 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 RIPOR3Q96MK2 946 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 POLR3CQ9BUI4 534 aaPredicted RBP13.68□□□□□ -0.22
TPM3-204ENST00000323144 EMILIN2Q9BXX0 1053 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 CCDC113Q9H0I3 377 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 FOXP1Q9H334 677 aaPredicted RBP13.68□□□□□ -0.22
TPM3-204ENST00000323144 POLD4Q9HCU8 107 aa13.68□□□□□ -0.22
TPM3-204ENST00000323144 ZDBF2Q9HCK1 2354 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 MYO10Q9HD67 2058 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 ARHGEF35A5YM69 484 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 CARNS1A5YM72 827 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 PP2D1A8MPX8 630 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 PTGESO14684 152 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 TEX28O15482 410 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 RECQL4O94761 1208 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 PRKCBP05771 671 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 KLRC2P26717 231 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 MTMR3Q13615 1198 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 BMS1Q14692 1282 aaKnown RBP13.67□□□□□ -0.22
TPM3-204ENST00000323144 FUT10Q6P4F1 479 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 PADI6Q6TGC4 694 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 ALYREFQ86V81 257 aaKnown RBP13.67□□□□□ -0.22
TPM3-204ENST00000323144 GLYCTKQ8IVS8 523 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 SUGP1Q8IWZ8 645 aaKnown RBP13.67□□□□□ -0.22
TPM3-204ENST00000323144 FBXO18Q8NFZ0 1043 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 RPS6KC1Q96S38 1066 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 LLPHQ9BRT6 129 aaKnown RBP13.67□□□□□ -0.22
TPM3-204ENST00000323144 UBN1Q9NPG3 1134 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 MRPL17Q9NRX2 175 aaKnown RBP13.67□□□□□ -0.22
TPM3-204ENST00000323144 KANSL3Q9P2N6 904 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 GIT1Q9Y2X7 761 aa13.67□□□□□ -0.22
TPM3-204ENST00000323144 CASTOR2A6NHX0 329 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 RFPL2O75678 378 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 KIF4AO95239 1232 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 RPL17P18621 184 aaKnown RBP13.66□□□□□ -0.22
TPM3-204ENST00000323144 RPA1P27694 616 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 HMGN5P82970 282 aaKnown RBP13.66□□□□□ -0.22
TPM3-204ENST00000323144 TCF15Q12870 199 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 ORC2Q13416 577 aaPredicted RBP13.66□□□□□ -0.22
TPM3-204ENST00000323144 GNL2Q13823 731 aaKnown RBP13.66□□□□□ -0.22
TPM3-204ENST00000323144 CCDC149Q6ZUS6 474 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 GPR149Q86SP6 731 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 PPFIBP1Q86W92 1011 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 ZBTB8OSQ8IWT0 167 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 HACE1Q8IYU2 909 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 C4orf32Q8N8J7 132 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 ERMNQ8TAM6 284 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 GPR62Q9BZJ7 368 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 PRMT7Q9NVM4 692 aaPredicted RBP13.66□□□□□ -0.22
TPM3-204ENST00000323144 PARP2Q9UGN5 583 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 SORCS3Q9UPU3 1222 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 PCDHB6Q9Y5E3 794 aa13.66□□□□□ -0.22
TPM3-204ENST00000323144 DOCK6Q96HP0 2047 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 A0A1B0GUA9 196 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
TPM3-204ENST00000323144 CD2BP2O95400 341 aaKnown RBP13.65□□□□□ -0.22
TPM3-204ENST00000323144 GLUD1P00367 558 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 ALDH2P05091 517 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 ADH1AP07327 375 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 CCT6AP40227 531 aaKnown RBP13.65□□□□□ -0.22
TPM3-204ENST00000323144 NAMPTP43490 491 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 MRE11P49959 708 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 TOB1P50616 345 aaPredicted RBP13.65□□□□□ -0.22
TPM3-204ENST00000323144 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.222e-6■■■□□ 15.5
TPM3-204ENST00000323144 DSG1Q02413 1049 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 FAM187BQ17R55 369 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 RTP2Q5QGT7 225 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 KIAA0319Q5VV43 1072 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 HAUS3Q68CZ6 603 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 PRSS55Q6UWB4 352 aaPredicted RBP13.65□□□□□ -0.22
TPM3-204ENST00000323144 SNX29Q8TEQ0 813 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 PRIMPOLQ96LW4 560 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 NACC1Q96RE7 527 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 BHMT2Q9H2M3 363 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 FZD8Q9H461 694 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 SH2B1Q9NRF2 756 aaPredicted RBP13.65□□□□□ -0.22
TPM3-204ENST00000323144 FAM86C1Q9NVL1 165 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 SNTG2Q9NY99 539 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 ADAM28Q9UKQ2 775 aa13.65□□□□□ -0.22
TPM3-204ENST00000323144 CLUHO75153 1309 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 N4BP3O15049 544 aa13.64□□□□□ -0.23
TPM3-204ENST00000323144 SPATA31D3P0C874 917 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms