RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 CTTNQ14247 550 aaKnown RBP13.09□□□□□ -0.31
SEC24A-201ENST00000322887 MESDQ14696 234 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 NUGGCQ68CJ6 796 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 CDAN1Q8IWY9 1227 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 ZNF526Q8TF50 670 aaPredicted RBP13.09□□□□□ -0.31
SEC24A-201ENST00000322887 SEC14L1Q92503 715 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 SPOCK2Q92563 424 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 SLITRK6Q9H5Y7 841 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 KIF9Q9HAQ2 790 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 FAM114A2Q9NRY5 505 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 TGFB1I1O43294 461 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 SPATA31C1P0DKV0 1188 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 YY1P25490 414 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 DLG4P78352 724 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 MGAT5Q09328 741 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 CNGA2Q16280 664 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 C2CD6Q53TS8 623 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 HP1BP3Q5SSJ5 553 aaPredicted RBP13.09□□□□□ -0.31
SEC24A-201ENST00000322887 TRIM68Q6AZZ1 485 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 FAM47EQ6ZV65 393 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 BZW1Q7L1Q6 419 aaKnown RBP13.09□□□□□ -0.31
SEC24A-201ENST00000322887 CYP4X1Q8N118 509 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 FITM2Q8N6M3 262 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 C1orf54Q8WWF1 131 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 TMEM237Q96Q45 408 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 MTMR4Q9NYA4 1195 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 SAMD15Q9P1V8 674 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 ZMYND8Q9ULU4 1186 aaPredicted RBP13.09□□□□□ -0.31
SEC24A-201ENST00000322887 ALG6Q9Y672 507 aa13.09□□□□□ -0.31
SEC24A-201ENST00000322887 FOXN3O00409 490 aaPredicted RBP13.08□□□□□ -0.32
SEC24A-201ENST00000322887 PYGMP11217 842 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 PTGIRP43119 386 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 MARSP56192 900 aaKnown RBP13.08□□□□□ -0.32
SEC24A-201ENST00000322887 SEMA3FQ13275 785 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 LLGL2Q6P1M3 1020 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 LZTS2Q9BRK4 669 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.32
SEC24A-201ENST00000322887 NKX1-2Q9UD57 310 aaPredicted RBP13.08□□□□□ -0.32
SEC24A-201ENST00000322887 PFASO15067 1338 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 EML1O00423 815 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 PIAS1O75925 651 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 ITGBL1O95965 494 aaPredicted RBP13.08□□□□□ -0.32
SEC24A-201ENST00000322887 CETPP11597 493 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 NQO1P15559 274 aaKnown RBP13.08□□□□□ -0.32
SEC24A-201ENST00000322887 VCAM1P19320 739 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 PPATQ06203 517 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 MAPK7Q13164 816 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 CERKLQ49MI3 558 aaPredicted RBP13.08□□□□□ -0.32
SEC24A-201ENST00000322887 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
SEC24A-201ENST00000322887 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
SEC24A-201ENST00000322887 ANKS4BQ8N8V4 417 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 SLC30A5Q8TAD4 765 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 MICAL1Q8TDZ2 1067 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 MRRFQ96E11 262 aaKnown RBP13.08□□□□□ -0.32
SEC24A-201ENST00000322887 KLRG1Q96E93 195 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 PCIF1Q9H4Z3 704 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 SYNPO2Q9UMS6 1093 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 C15orf41Q9Y2V0 281 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 SMCHD1A6NHR9 2005 aa13.08□□□□□ -0.32
SEC24A-201ENST00000322887 IGKV6D-41A0A0C4DH26 115 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 TMEM120BA0PK00 339 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 FAM86B1E9PN63 330 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 FAM86B2P0C5J1 330 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 DLATP10515 647 aaKnown RBP13.07□□□□□ -0.32
SEC24A-201ENST00000322887 CAP2P40123 477 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 STAT1P42224 750 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 CLK2P49760 499 aaKnown RBP13.07□□□□□ -0.32
SEC24A-201ENST00000322887 NOL9Q5SY16 702 aaKnown RBP13.07□□□□□ -0.32
SEC24A-201ENST00000322887 CGB2Q6NT52 195 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 CCDC137Q6PK04 289 aaKnown RBP13.07□□□□□ -0.32
SEC24A-201ENST00000322887 SMC1BQ8NDV3 1235 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 LMBR1Q8WVP7 490 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 CTNNBL1Q8WYA6 563 aaPredicted RBP13.07□□□□□ -0.32
SEC24A-201ENST00000322887 TRIM6Q9C030 488 aaPredicted RBP13.07□□□□□ -0.32
SEC24A-201ENST00000322887 KCNMB3Q9NPA1 279 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 CTTNBP2NLQ9P2B4 639 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 GREB1LQ9C091 1923 aaPredicted RBP13.07□□□□□ -0.32
SEC24A-201ENST00000322887 RASGRF2O14827 1237 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 RIPK2O43353 540 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 KIF1CO43896 1103 aaKnown RBP13.07□□□□□ -0.32
SEC24A-201ENST00000322887 SNX3O60493 162 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 TOMM70O94826 608 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 GNA14O95837 355 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 CHRNB2P17787 502 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 ABL2P42684 1182 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 PHLDB3Q6NSJ2 640 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 TMEM179Q6ZVK1 233 aa13.07□□□□□ -0.32
SEC24A-201ENST00000322887 PAIP2Q9BPZ3 127 aaKnown RBP13.07□□□□□ -0.32
SEC24A-201ENST00000322887 BTNL10A8MVZ5 291 aa13.06□□□□□ -0.32
SEC24A-201ENST00000322887 GCKP35557 465 aa13.06□□□□□ -0.32
SEC24A-201ENST00000322887 SOX5P35711 763 aa13.06□□□□□ -0.32
SEC24A-201ENST00000322887 PRKCIP41743 596 aa13.06□□□□□ -0.32
SEC24A-201ENST00000322887 HOOK3Q86VS8 718 aa13.06□□□□□ -0.32
SEC24A-201ENST00000322887 CCDC105Q8IYK2 499 aa13.06□□□□□ -0.32
SEC24A-201ENST00000322887 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.06□□□□□ -0.32
SEC24A-201ENST00000322887 KLHL29Q96CT2 875 aa13.06□□□□□ -0.32
SEC24A-201ENST00000322887 YIPF3Q9GZM5 350 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms