RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 DONSONQ9NYP3 566 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 A0A0G2JND7 137 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 H0YCG3 227 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 DNAJC8O75937 253 aaPredicted RBP13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 NDUFB10O96000 172 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 MT-ND3P03897 115 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 FLT3P36888 993 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 DYNLT1P63172 113 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 KIRREL3Q8IZU9 778 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 SREK1Q8WXA9 508 aaKnown RBP13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 HAUS1Q96CS2 278 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 ERP27Q96DN0 273 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 CEP170P1Q96L14 293 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 NYAP2Q9P242 653 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 SCOCQ9UIL1 159 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 CNOT7Q9UIV1 285 aaKnown RBP13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 ITGA8P53708 1063 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 DLGAP5Q15398 846 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 ASTE1Q2TB18 679 aaPredicted RBP13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 BBS9Q3SYG4 887 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 CC2D2BQ6DHV5 1058 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 TUBB6Q9BUF5 446 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 CDC42EP4Q9H3Q1 356 aaKnown RBP13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 STOML1Q9UBI4 398 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 DCTN4Q9UJW0 460 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 PPFIA2O75334 1257 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 ESRRAP11474 423 aaPredicted RBP13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 DRD4P21917 467 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 RPL21P46778 160 aaKnown RBP13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 DNAJC24Q6P3W2 148 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 RHOT1Q8IXI2 618 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 FBXL13Q8NEE6 735 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 ZNF384Q8TF68 577 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 CENPTQ96BT3 561 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 KCTD10Q9H3F6 313 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 HSPBP1Q9NZL4 362 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 SUGT1Q9Y2Z0 365 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 USH1CQ9Y6N9 552 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 SCINQ9Y6U3 715 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 UBE4BO95155 1302 aa13.58□□□□□ -0.23
DNMT3A-202ENST00000321117 KCPQ6ZWJ8 1503 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 FAM47DPA6NHR8 397 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 STAM2O75886 525 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 TJP3O95049 919 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 SHBGP04278 402 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 P4HBP07237 508 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 SPDYCQ5MJ68 293 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 RC3H1Q5TC82 1133 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 ARHGEF16Q5VV41 709 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 PASD1Q8IV76 773 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 KCTD17Q8N5Z5 321 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 SLC20A1Q8WUM9 679 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 STAMBPL1Q96FJ0 436 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 RBM15Q96T37 977 aaKnown RBP eCLIP13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 TRIM55Q9BYV6 548 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 TRABDQ9H4I3 376 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 OLFML3Q9NRN5 406 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 LMNAP02545 664 aaKnown RBP13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 SLC12A3P55017 1021 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 ELF3P78545 371 aaPredicted RBP13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 GRIK5Q16478 980 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 ECM1Q16610 540 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 CFAP157Q5JU67 520 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 CCDC110Q8TBZ0 833 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 ATP8B4Q8TF62 1192 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 ARHGEF26Q96DR7 871 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 TSC22D3Q99576 134 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 GTF3C4Q9UKN8 822 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 ARHGAP42A6NI28 874 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 RIPK2O43353 540 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 HSPA1LP34931 641 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 RCN2Q14257 317 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 RASIP1Q5U651 963 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 BTBD6Q96KE9 485 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 ANKFY1Q9P2R3 1169 aa13.58□□□□□ -0.24
DNMT3A-202ENST00000321117 SPATA31A1Q5TZJ5 1347 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 LRRIQ4A6NIV6 560 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 GYG2O15488 501 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 ZBED4O75132 1171 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 MARSP56192 900 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 CDR2Q01850 454 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 GPS1Q13098 491 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 AGGF1Q8N302 714 aaeCLIP13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 RBM41Q96IZ5 413 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 SH2D3AQ9BRG2 576 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 KCND2Q9NZV8 630 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 MYH6P13533 1939 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 TXNDC9O14530 226 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 POLR2BP30876 1174 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 QARSP47897 775 aaKnown RBP13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 ZCWPW2Q504Y3 356 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 PPP1R2P3Q6NXS1 205 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 CDC42EP5Q6NZY7 148 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 MIGA2Q7L4E1 593 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 PDIK1LQ8N165 341 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 HES6Q96HZ4 224 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 TRIM4Q9C037 500 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 NEUROG2Q9H2A3 272 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 L3MBTL1Q9Y468 752 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms