RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 H0YHG0 523 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 KIAA0391O15091 583 aaKnown RBP18.72■□□□□ 0.59
COL9A1-201ENST00000320755 RPL21P46778 160 aaKnown RBP18.72■□□□□ 0.59
COL9A1-201ENST00000320755 PMS2P54278 862 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 MFAP3P55082 362 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 FMO1Q01740 532 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 SLC20A2Q08357 652 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 DMP1Q13316 513 aaPredicted RBP18.72■□□□□ 0.59
COL9A1-201ENST00000320755 SNX1Q13596 522 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 ALCAMQ13740 583 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 CHADLQ6NUI6 762 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 RNF207Q6ZRF8 634 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 FAM71AQ8IYT1 594 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 BICD1Q96G01 975 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 CEP170P1Q96L14 293 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 RASAL2Q9UJF2 1139 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 RPTORQ8N122 1335 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 TBC1D12O60347 775 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 CYP11B1P15538 503 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 CXCL9Q07325 125 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 KRT39Q6A163 491 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 ANO5Q75V66 913 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 NIM1KQ8IY84 436 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 BSNDQ8WZ55 320 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 SEMA4AQ9H3S1 761 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 ZDHHC18Q9NUE0 388 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 SYNGAP1Q96PV0 1343 aa18.72■□□□□ 0.59
COL9A1-201ENST00000320755 MIF4GDA9UHW6 222 aaKnown RBP18.71■□□□□ 0.59
COL9A1-201ENST00000320755 PHF2O75151 1096 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 FGFR4P22455 802 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 SSTR3P32745 418 aaPredicted RBP18.71■□□□□ 0.59
COL9A1-201ENST00000320755 BAATQ14032 418 aaPredicted RBP18.71■□□□□ 0.59
COL9A1-201ENST00000320755 SLC29A2Q14542 456 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 RTKN2Q8IZC4 609 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 TMEM161BQ8NDZ6 487 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 PARD3BQ8TEW8 1205 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 KAT2BQ92831 832 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 GABBR1Q9UBS5 961 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 SLC12A6Q9UHW9 1150 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 FZD1Q9UP38 647 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 RIPK3Q9Y572 518 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 COL2A1P02458 1487 aaPredicted RBP18.71■□□□□ 0.59
COL9A1-201ENST00000320755 GMNCA6NCL1 334 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 WDR64B1ANS9 1081 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 PPFIA2O75334 1257 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 FAM107AO95990 144 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 SELENOSQ9BQE4 189 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 PDCD2LQ9BRP1 358 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 CCDC113Q9H0I3 377 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 SLC38A10Q9HBR0 1119 aa18.71■□□□□ 0.59
COL9A1-201ENST00000320755 PHF20L1A8MW92 1017 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 HNRNPDLO14979 420 aaKnown RBP18.7■□□□□ 0.58
COL9A1-201ENST00000320755 P4HA2O15460 535 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 MEFVO15553 781 aaPredicted RBP18.7■□□□□ 0.58
COL9A1-201ENST00000320755 ATP2C2O75185 946 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 PEX5P50542 639 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 PDE6CP51160 858 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 QPCTQ16769 361 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 EMC10Q5UCC4 262 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 DENND2CQ68D51 928 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 C11orf63Q6NUN7 778 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 LLGL2Q6P1M3 1020 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 C1orf131Q8NDD1 294 aaKnown RBP18.7■□□□□ 0.58
COL9A1-201ENST00000320755 C1orf54Q8WWF1 131 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 RNF25Q96BH1 459 aaPredicted RBP18.7■□□□□ 0.58
COL9A1-201ENST00000320755 CYFIP2Q96F07 1278 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 NT5C1BQ96P26 610 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 PSMD1Q99460 953 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 TRIM7Q9C029 511 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 WDR46O15213 610 aaKnown RBP18.7■□□□□ 0.58
COL9A1-201ENST00000320755 DPEP1P16444 411 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 SF3B2Q13435 895 aaKnown RBP18.7■□□□□ 0.58
COL9A1-201ENST00000320755 DHX34Q14147 1143 aaKnown RBP18.7■□□□□ 0.58
COL9A1-201ENST00000320755 DAB2IPQ5VWQ8 1189 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 ZDHHC24Q6UX98 284 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 FAM83AQ86UY5 434 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 C4orf19Q8IY42 314 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 RAPGEF5Q92565 580 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 FAM213AQ9BRX8 229 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 RPAP3Q9H6T3 665 aaPredicted RBP18.7■□□□□ 0.58
COL9A1-201ENST00000320755 ZNRF3Q9ULT6 936 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 FAM187AA6NFU0 413 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 CLDN3O15551 220 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 MAPTP10636 758 aaKnown RBP18.7■□□□□ 0.58
COL9A1-201ENST00000320755 PPP2R5EQ16537 467 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 NLRX1Q86UT6 975 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 ATG4CQ96DT6 458 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 EXOC7Q9UPT5 735 aa18.7■□□□□ 0.58
COL9A1-201ENST00000320755 RBBP6Q7Z6E9 1792 aaKnown RBP18.7■□□□□ 0.58
COL9A1-201ENST00000320755 PFASO15067 1338 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 RARAP10276 462 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 CHRNA3P32297 505 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 PTGIRP43119 386 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 SWSAP1Q6NVH7 229 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 SV2AQ7L0J3 742 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 TEX2Q8IWB9 1127 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 FBXL13Q8NEE6 735 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 SHC3Q92529 594 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 IWS1Q96ST2 819 aa18.69■□□□□ 0.58
COL9A1-201ENST00000320755 PXMP2Q9NR77 195 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms