RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 ZNF341Q9BYN7 854 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 PI4K2BG5E9Z4 385 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 TBX3O15119 743 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 SLC16A4O15374 487 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 RPS6KA4O75676 772 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 ACTR2P61160 394 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 TTC23LQ6PF05 361 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 C4orf22Q6V702 233 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 ARHGAP27Q6ZUM4 889 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 GLYCTKQ8IVS8 523 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 SLC26A7Q8TE54 656 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 KRT35Q92764 455 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 FBXO2Q9UK22 296 aaPredicted RBP20.11■□□□□ 0.81
UBE2N-201ENST00000318066 H0Y626 953 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 NCK2O43639 380 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 TRIM16O95361 564 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 SNRPFP62306 86 aaKnown RBP20.11■□□□□ 0.81
UBE2N-201ENST00000318066 TRIM28Q13263 835 aaKnown RBP20.11■□□□□ 0.81
UBE2N-201ENST00000318066 DUOXA2Q1HG44 320 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 EDRF1Q3B7T1 1238 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 RABGAP1LQ5R372 815 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 PATL1Q86TB9 770 aaKnown RBP20.11■□□□□ 0.81
UBE2N-201ENST00000318066 EFHBQ8N7U6 833 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 TTC7AQ9ULT0 858 aaPredicted RBP20.11■□□□□ 0.81
UBE2N-201ENST00000318066 MROH7-TTC4A0A0A0MT08 1334 aa20.11■□□□□ 0.81
UBE2N-201ENST00000318066 A0A1W2PQJ5 194 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 M0QYV0 167 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 DEAF1O75398 565 aaPredicted RBP20.1■□□□□ 0.81
UBE2N-201ENST00000318066 PDHA1P08559 390 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 CCND1P24385 295 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 C7orf25Q9BPX7 421 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 FRMD8Q9BZ67 464 aaPredicted RBP20.1■□□□□ 0.81
UBE2N-201ENST00000318066 PKD2L2Q9NZM6 624 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 EHD2Q9NZN4 543 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 BLOC1S6Q9UL45 172 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 ZDHHC9Q9Y397 364 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 USP27XA6NNY8 438 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 ATP6V1E1P36543 226 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 ZBTB41Q5SVQ8 909 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 ANGPTL8Q6UXH0 198 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 SETD3Q86TU7 594 aaPredicted RBP20.1■□□□□ 0.81
UBE2N-201ENST00000318066 ADSSL1Q8N142 457 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 ZNF560Q96MR9 790 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 SLC24A3Q9HC58 644 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 TUBE1Q9UJT0 475 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 KDM6BO15054 1643 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 STXBP3O00186 592 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 EIF3DO15371 548 aaKnown RBP eCLIP20.1■□□□□ 0.81
UBE2N-201ENST00000318066 PRAMEP78395 509 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 SLC27A3Q5K4L6 730 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 SH3TC2Q8TF17 1288 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 DACH2Q96NX9 599 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 TRIM9Q9C026 710 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 ZNF302Q9NR11 478 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 ZNF197O14709 1029 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 RHOBTB3O94955 611 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 SCP2P22307 547 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 EXOSC10Q01780 885 aaKnown RBP20.1■□□□□ 0.81
UBE2N-201ENST00000318066 KRT27Q7Z3Y8 459 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 THOC1Q96FV9 657 aaKnown RBP20.1■□□□□ 0.81
UBE2N-201ENST00000318066 SHROOM2Q13796 1616 aa20.1■□□□□ 0.81
UBE2N-201ENST00000318066 EFCAB14O75071 495 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 RASSF3Q86WH2 238 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 GSPT2Q8IYD1 628 aaKnown RBP20.09■□□□□ 0.81
UBE2N-201ENST00000318066 ZNF473Q8WTR7 871 aaKnown RBP20.09■□□□□ 0.81
UBE2N-201ENST00000318066 HNRNPLLQ8WVV9 542 aaKnown RBP20.09■□□□□ 0.81
UBE2N-201ENST00000318066 LZICQ8WZA0 190 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 PIGBQ92521 554 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 CCT8L2Q96SF2 557 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 MOV10L1Q9BXT6 1211 aaKnown RBP20.09■□□□□ 0.81
UBE2N-201ENST00000318066 HDAC6Q9UBN7 1215 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 KLHL2O95198 593 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 MRPS25P82663 173 aaKnown RBP20.09■□□□□ 0.81
UBE2N-201ENST00000318066 OTUB1Q96FW1 271 aaPredicted RBP20.09■□□□□ 0.81
UBE2N-201ENST00000318066 KIF17Q9P2E2 1029 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 PSMD14O00487 310 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 ZBTB22O15209 634 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 ARSEP51690 589 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 WDR24Q96S15 920 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 ZFATQ9P243 1243 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 APOL1O14791 398 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 ADRA2BP18089 450 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 IRX1P78414 480 aaPredicted RBP20.09■□□□□ 0.81
UBE2N-201ENST00000318066 KLC1Q07866 573 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 ACTN3Q08043 901 aaPredicted RBP20.09■□□□□ 0.81
UBE2N-201ENST00000318066 ZNF394Q53GI3 561 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 KCNV1Q6PIU1 500 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 KDM4CQ9H3R0 1056 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 ZCCHC17Q9NP64 241 aaKnown RBP20.09■□□□□ 0.81
UBE2N-201ENST00000318066 NSMCE4AQ9NXX6 385 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 AMACRQ9UHK6 382 aa20.09■□□□□ 0.81
UBE2N-201ENST00000318066 CRKP46108 304 aa20.08■□□□□ 0.81
UBE2N-201ENST00000318066 CCZ1BP86790 482 aa20.08■□□□□ 0.81
UBE2N-201ENST00000318066 CCZ1P86791 482 aaPredicted RBP20.08■□□□□ 0.81
UBE2N-201ENST00000318066 METTL16Q86W50 562 aaKnown RBP20.08■□□□□ 0.81
UBE2N-201ENST00000318066 SCFD1Q8WVM8 642 aa20.08■□□□□ 0.81
UBE2N-201ENST00000318066 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.81
UBE2N-201ENST00000318066 KIF1BO60333 1816 aa20.08■□□□□ 0.81
UBE2N-201ENST00000318066 RNF219Q5W0B1 726 aaPredicted RBP20.08■□□□□ 0.81
UBE2N-201ENST00000318066 LRRC1Q9BTT6 524 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms