RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 ATP1A1P05023 1023 aaKnown RBP7.78□□□□□ -1.16
NPHP1-201ENST00000316534 GZMAP12544 262 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 TM4SF4P48230 202 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 CCDC122Q5T0U0 273 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 TMEM63BQ5T3F8 832 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 MMGT1Q8N4V1 131 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 CGRRF1Q99675 332 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 TLR10Q9BXR5 811 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 ZHX3Q9H4I2 956 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 VRTNQ9H8Y1 702 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 IFT122Q9HBG6 1241 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 GJD2Q9UKL4 321 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 UTRNP46939 3433 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 PTPRJQ12913 1337 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 MBLAC1A4D2B0 266 aaPredicted RBP7.78□□□□□ -1.16
NPHP1-201ENST00000316534 GH1P01241 217 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 ZNF865P0CJ78 1059 aaPredicted RBP7.78□□□□□ -1.16
NPHP1-201ENST00000316534 CYP2J2P51589 502 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 SOX10P56693 466 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 PTENP60484 403 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 KIF5AQ12840 1032 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 DRAP1Q14919 205 aaPredicted RBP7.78□□□□□ -1.16
NPHP1-201ENST00000316534 PCBP1Q15365 356 aaKnown RBP eCLIP7.78□□□□□ -1.16
NPHP1-201ENST00000316534 ARHGAP29Q52LW3 1261 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 CACNA2D4Q7Z3S7 1137 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 ZNF677Q86XU0 584 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 BRSK2Q8IWQ3 736 aa7.78□□□□□ -1.16
NPHP1-201ENST00000316534 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.78□□□□□ -1.16
NPHP1-201ENST00000316534 GRID2IPA4D2P6 1211 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 MANSC4A6NHS7 340 aaPredicted RBP7.77□□□□□ -1.16
NPHP1-201ENST00000316534 A6NJR5 290 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 ADCY6O43306 1168 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 TRIM49P0CI25 452 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 TRIM49CP0CI26 452 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 KRT13P13646 458 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 POLGP54098 1239 aaPredicted RBP7.77□□□□□ -1.16
NPHP1-201ENST00000316534 INHBEP58166 350 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 LAMTOR4Q0VGL1 99 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 MAP1SQ66K74 1059 aaPredicted RBP7.77□□□□□ -1.16
NPHP1-201ENST00000316534 FBXO16Q8IX29 292 aaPredicted RBP7.77□□□□□ -1.16
NPHP1-201ENST00000316534 KIFC3Q9BVG8 833 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 PDGFCQ9NRA1 345 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 TNFSF13BQ9Y275 285 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 TLL2Q9Y6L7 1015 aa7.77□□□□□ -1.16
NPHP1-201ENST00000316534 ACKR2O00590 384 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 PPFIA4O75335 1185 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 CAPN15O75808 1086 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 MAGEA1P43355 309 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 GSCP56915 257 aaPredicted RBP7.77□□□□□ -1.17
NPHP1-201ENST00000316534 KLHL30Q0D2K2 578 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 DRP2Q13474 957 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 SPA17Q15506 151 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 MTERF2Q49AM1 385 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 GJB7Q6PEY0 223 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 PLEKHH3Q7Z736 793 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 WDR49Q8IV35 697 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 C2orf69Q8N8R5 385 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 NPLOC4Q8TAT6 608 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 EPS8L1Q8TE68 723 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 SLC7A3Q8WY07 619 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 HES6Q96HZ4 224 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 ERAP1Q9NZ08 941 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 MYH10P35580 1976 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 EVPLQ92817 2033 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 MAGEB2O15479 319 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 B4GALT4O60513 344 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 LGALS2P05162 132 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 TUBBP07437 444 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 MMP3P08254 477 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 CCDC172P0C7W6 258 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 CYP27A1Q02318 531 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 DCAF17Q5H9S7 520 aaPredicted RBP7.77□□□□□ -1.17
NPHP1-201ENST00000316534 CHADLQ6NUI6 762 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 SYCP3Q8IZU3 236 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 FBXL13Q8NEE6 735 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 CRACR2AQ9BSW2 395 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 PAGR1Q9BTK6 254 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 UPF3AQ9H1J1 476 aaKnown RBP7.77□□□□□ -1.17
NPHP1-201ENST00000316534 NLRC4Q9NPP4 1024 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 RAB20Q9NX57 234 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 TFR2Q9UP52 801 aa7.77□□□□□ -1.17
NPHP1-201ENST00000316534 TOM1L1O75674 476 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 CYP1A1P04798 512 aaPredicted RBP7.76□□□□□ -1.17
NPHP1-201ENST00000316534 CYP1A2P05177 515 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 SMPD1P17405 629 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 GPR162Q16538 588 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 TDRD10Q5VZ19 366 aaKnown RBP7.76□□□□□ -1.17
NPHP1-201ENST00000316534 C11orf63Q6NUN7 778 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 SV2AQ7L0J3 742 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 USP37Q86T82 979 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 PRPF31Q8WWY3 499 aaKnown RBP7.76□□□□□ -1.17
NPHP1-201ENST00000316534 AGPAT1Q99943 283 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 ABHD16BQ9H3Z7 469 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 RRAGCQ9HB90 399 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 ZNF233A6NK53 670 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 FOXN3O00409 490 aaPredicted RBP7.76□□□□□ -1.17
NPHP1-201ENST00000316534 IGF2BP3O00425 579 aaKnown RBP eCLIP7.76□□□□□ -1.17
NPHP1-201ENST00000316534 F2P00734 622 aa7.76□□□□□ -1.17
NPHP1-201ENST00000316534 TXNP10599 105 aaKnown RBP7.76□□□□□ -1.17
NPHP1-201ENST00000316534 UNGP13051 313 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms