RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 KPNA5O15131 536 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 HYAL3O43820 417 aaPredicted RBP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 COL6A1P12109 1028 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 LIMS1P48059 325 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 AK2P54819 239 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 GP2P55259 537 aaKnown RBP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 NOGQ13253 232 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 KCNMB1Q16558 191 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 C1orf228Q6PIY5 440 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 CBLL1Q75N03 491 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 MAEAQ7L5Y9 396 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 ZSWIM9Q86XI8 627 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 SH2D3CQ8N5H7 860 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 NSUN6Q8TEA1 469 aaKnown RBP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 NKD2Q969F2 451 aaPredicted RBP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 C7orf25Q9BPX7 421 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 PDCD2LQ9BRP1 358 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 LDAHQ9H6V9 325 aa4.99□□□□□ -1.61
SMCO3-201ENST00000316048 MBD1Q9UIS9 605 aaPredicted RBP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 DHX57Q6P158 1386 aaKnown RBP4.99□□□□□ -1.61
SMCO3-201ENST00000316048 LRRIQ1Q96JM4 1722 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 GOLIM4O00461 696 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 ABLIM1O14639 778 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 NRP2O60462 931 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 MLLT6P55198 1093 aaPredicted RBP4.98□□□□□ -1.61
SMCO3-201ENST00000316048 NRG3P56975 720 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 STK3Q13188 491 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 CCDC178Q5BJE1 867 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 TMEM200BQ69YZ2 307 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 B3GNT8Q7Z7M8 397 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 ATG4DQ86TL0 474 aaPredicted RBP4.98□□□□□ -1.61
SMCO3-201ENST00000316048 IGDCC3Q8IVU1 814 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 DRC7Q8IY82 874 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 FAM186BQ8IYM0 893 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 ZGPATQ8N5A5 531 aaKnown RBP4.98□□□□□ -1.61
SMCO3-201ENST00000316048 GPR156Q8NFN8 814 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.98□□□□□ -1.61
SMCO3-201ENST00000316048 CCHCR1Q8TD31 782 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 LRTOMTQ8WZ04 291 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 SGCZQ96LD1 299 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 DIRC2Q96SL1 478 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 C11orf84Q9BUA3 381 aaPredicted RBP4.98□□□□□ -1.61
SMCO3-201ENST00000316048 C14orf93Q9H972 538 aaKnown RBP4.98□□□□□ -1.61
SMCO3-201ENST00000316048 NGRNQ9NPE2 291 aaKnown RBP4.98□□□□□ -1.61
SMCO3-201ENST00000316048 PCDHA3Q9Y5H8 950 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 RAPGEF6Q8TEU7 1601 aa4.98□□□□□ -1.61
SMCO3-201ENST00000316048 H0Y858 1186 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 KNG1P01042 644 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 GAAP10253 952 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 IGFBP6P24592 240 aaPredicted RBP4.97□□□□□ -1.61
SMCO3-201ENST00000316048 KCNQ1P51787 676 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 UBE3CQ15386 1083 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 MST1LQ2TV78 715 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 LONRF3Q496Y0 759 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 ZCCHC14Q8WYQ9 949 aaKnown RBP4.97□□□□□ -1.61
SMCO3-201ENST00000316048 SLC35A4Q96G79 324 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 CLPTM1LQ96KA5 538 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 WDR92Q96MX6 357 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 SAMD11Q96NU1 681 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 MYD88Q99836 296 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 TLR9Q9NR96 1032 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 CFAP20Q9Y6A4 193 aaKnown RBP4.97□□□□□ -1.61
SMCO3-201ENST00000316048 OAS3Q9Y6K5 1087 aaKnown RBP4.97□□□□□ -1.61
SMCO3-201ENST00000316048 RAB3GAP2Q9H2M9 1393 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 MIA2Q96PC5 1412 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 A0A0G2JNJ9 132 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 NBNO60934 754 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 MAFO75444 373 aaPredicted RBP4.97□□□□□ -1.61
SMCO3-201ENST00000316048 PAPLNO95428 1278 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 ZKSCAN1P17029 563 aaPredicted RBP4.97□□□□□ -1.61
SMCO3-201ENST00000316048 MAP3K12Q12852 859 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 CHAF1AQ13111 956 aaPredicted RBP4.97□□□□□ -1.61
SMCO3-201ENST00000316048 LRP8Q14114 963 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 TUBB8Q3ZCM7 444 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 ZMYM1Q5SVZ6 1142 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 SYDE1Q6ZW31 735 aaPredicted RBP4.97□□□□□ -1.61
SMCO3-201ENST00000316048 ZBTB8AQ96BR9 441 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 CCDC138Q96M89 665 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 CLIC6Q96NY7 704 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 MCOLN1Q9GZU1 580 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 KMT5AQ9NQR1 393 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 TDP1Q9NUW8 608 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 SAE1Q9UBE0 346 aaPredicted RBP4.97□□□□□ -1.61
SMCO3-201ENST00000316048 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.97□□□□□ -1.61
SMCO3-201ENST00000316048 Q9UFV3 132 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 ABCF2Q9UG63 623 aa4.97□□□□□ -1.61
SMCO3-201ENST00000316048 NUP153P49790 1475 aaKnown RBP4.96□□□□□ -1.61
SMCO3-201ENST00000316048 A0A088AWK7 358 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 ABHD14A-ACY1A0A1B0GW23 586 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 NCK2O43639 380 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 AMY1AP04745 511 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 PAX3P23760 479 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 HK3P52790 923 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 CACNB3P54284 484 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 PLS1Q14651 629 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 ACAP1Q15027 740 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 KHDC1Q4VXA5 237 aaKnown RBP4.96□□□□□ -1.62
SMCO3-201ENST00000316048 MPZL3Q6UWV2 235 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 PRR23BQ6ZRT6 265 aa4.96□□□□□ -1.62
SMCO3-201ENST00000316048 HEATR3Q7Z4Q2 680 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms