RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 ANKRD35Q8N283 1001 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 ZSWIM1Q9BR11 485 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 SMIM24O75264 130 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 ECE1P42892 770 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 PRELPP51888 382 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 IRX4P78413 519 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 BBS9Q3SYG4 887 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 SWT1Q5T5J6 900 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 IZUMO3Q5VZ72 239 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 PLA2G4FQ68DD2 849 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 PPP1R21Q6ZMI0 780 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 SLC13A5Q86YT5 568 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 CCDC89Q8N998 374 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 LRRC37BQ96QE4 947 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 PCDHB4Q9Y5E5 795 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 ASTN1O14525 1302 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 GH1P01241 217 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 YY1P25490 414 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 ALDH5A1P51649 535 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 LLGL2Q6P1M3 1020 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 AGAP11Q8TF27 550 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 FAM213AQ9BRX8 229 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 KCNQ5Q9NR82 932 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 SPATA31A1Q5TZJ5 1347 aa15.3■□□□□ 0.04
CSNK1D-202ENST00000314028 DDTLA6NHG4 134 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 RARAP10276 462 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 OVGP1Q12889 678 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 CLUL1Q15846 466 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 TSNAXIP1Q2TAA8 658 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 ERMARDQ5T6L9 678 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 HAUS6Q7Z4H7 955 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 PALM2Q8IXS6 379 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 LRRC57Q8N9N7 239 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 SLC12A6Q9UHW9 1150 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 RBAK-RBAKDNI3L0D1 243 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 SHMT1P34896 483 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 WDR78Q5VTH9 848 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 NAIF1Q69YI7 327 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 PHLDB3Q6NSJ2 640 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 LONP2Q86WA8 852 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 CBWD2Q8IUF1 395 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 PRELID2Q8N945 189 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 GRK7Q8WTQ7 553 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 SLC5A5Q92911 643 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 RAB3IPQ96QF0 476 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.29■□□□□ 0.042e-8■■□□□ 13.7
CSNK1D-202ENST00000314028 HAO1Q9UJM8 370 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 CCDC160A6NGH7 325 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 RIPK2O43353 540 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 DMP1Q13316 513 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 CAPRIN2Q6IMN6 1127 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 ZBED8Q8IZ13 594 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 NUDCD1Q96RS6 583 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 CYTH2Q99418 400 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 RAB20Q9NX57 234 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 HSPBP1Q9NZL4 362 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 TRAF3IP3Q9Y228 551 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 ARL2BPQ9Y2Y0 163 aa15.29■□□□□ 0.04
CSNK1D-202ENST00000314028 CFAP69A5D8W1 941 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 LRRIQ4A6NIV6 560 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 KIAA0391O15091 583 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 ARP10275 920 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 NQO1P15559 274 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 ATP2A2P16615 1042 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 PIK3CAP42336 1068 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 LIG4P49917 911 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 RASA3Q14644 834 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 ZNF668Q96K58 619 aaPredicted RBP15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 CEP170P1Q96L14 293 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 RBM15Q96T37 977 aaKnown RBP eCLIP15.28■□□□□ 0.049e-8■■■□□ 17.2
CSNK1D-202ENST00000314028 KMT5AQ9NQR1 393 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 PRR12Q9ULL5 1215 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 GOLGB1Q14789 3259 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 KRT1P04264 644 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 FNTAP49354 379 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 SOX10P56693 466 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 GPS1Q13098 491 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 CEP55Q53EZ4 464 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 SLC10A5Q5PT55 438 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 BSPRYQ5W0U4 402 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 TMEM270Q6UE05 265 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 SCARA5Q6ZMJ2 495 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 PPFIBP2Q8ND30 876 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 TTC17Q96AE7 1141 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 RILPQ96NA2 401 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 OSBPL1AQ9BXW6 950 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 WDR11Q9BZH6 1224 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 CHST7Q9NS84 486 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 DONSONQ9NYP3 566 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 SLC16A3O15427 465 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 RTN2O75298 545 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 GJB6O95452 261 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 KRT19P08727 400 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 TROVE2P10155 538 aaKnown RBP eCLIP15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 RALAP11233 206 aa15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 BASP1P80723 227 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 RNASELQ05823 741 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-202ENST00000314028 MDH1BQ5I0G3 518 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms