RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 RIT2Q99578 217 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 RSAD1Q9HA92 442 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 ADAMTS13Q76LX8 1427 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 NID2Q14112 1375 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 ADGRA2Q96PE1 1338 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 CNGA3Q16281 694 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 DDX50Q9BQ39 737 aaKnown RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 TPX2Q9ULW0 747 aaKnown RBP9.34□□□□□ -0.91
COL6A5-202ENST00000312481 CSADQ9Y600 493 aa9.34□□□□□ -0.91
COL6A5-202ENST00000312481 EFCAB14O75071 495 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 RXRAP19793 462 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 ANO3Q9BYT9 981 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 ANKEF1Q9NU02 776 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 TEKT2Q9UIF3 430 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 LRCH1Q9Y2L9 728 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 PHEXP78562 749 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 SKOR1P84550 965 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 ANKS1AQ92625 1134 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 OTUB1Q96FW1 271 aaPredicted RBP9.33□□□□□ -0.92
COL6A5-202ENST00000312481 VCPKMTQ9H867 229 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 PCDHB2Q9Y5E7 798 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 SCN4AP35499 1836 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 TTC26A0AVF1 554 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 DGAT1O75907 488 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 MAGOHP61326 146 aaKnown RBP9.33□□□□□ -0.92
COL6A5-202ENST00000312481 SNX17Q15036 470 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 EAPPQ56P03 285 aaPredicted RBP9.33□□□□□ -0.92
COL6A5-202ENST00000312481 ARMC3Q5W041 872 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 NT5DC4Q86YG4 428 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 RSPH1Q8WYR4 309 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 EVPLQ92817 2033 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 CNTRLQ7Z7A1 2325 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 H0Y626 953 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 KATNA1O75449 491 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 TRIM16O95361 564 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 VHLP40337 213 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 PRCPP42785 496 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 SATB1Q01826 763 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 EPS8Q12929 822 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 TTC8Q8TAM2 541 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 FAXDC2Q96IV6 333 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 SERPINA10Q9UK55 444 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 MAPK8IP1Q9UQF2 711 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 TUBGCP6Q96RT7 1819 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 YY1P25490 414 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 RFC5P40937 340 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 PHKA2P46019 1235 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 RASGRF1Q13972 1273 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 DYMQ7RTS9 669 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 UNC5CLQ8IV45 518 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 FAM133AQ8N9E0 248 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 DLG3Q92796 817 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 PKD2L2Q9NZM6 624 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 GTF3C4Q9UKN8 822 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 SHOC2Q9UQ13 582 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 JCADQ9P266 1359 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 ELF1P32519 619 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 DEFA1P59665 94 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 DEFA3P59666 94 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 CDKAL1Q5VV42 579 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 PASD1Q8IV76 773 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 USP38Q8NB14 1042 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 SH3GL1Q99961 368 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 FUCA2Q9BTY2 467 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 KRT1P04264 644 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 GRK2P25098 689 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 MCAMP43121 646 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 COASYQ13057 564 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 BEND6Q5SZJ8 279 aaPredicted RBP9.33□□□□□ -0.92
COL6A5-202ENST00000312481 LRRC39Q96DD0 335 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 BTG4Q9NY30 223 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 BFARQ9NZS9 450 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 ADAM22Q9P0K1 906 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 PAK5Q9P286 719 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 K7ERI5 159 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 CFBP00751 764 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 KRT8P05787 483 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 ATP1A3P13637 1013 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 PSMA4P25789 261 aaKnown RBP9.33□□□□□ -0.92
COL6A5-202ENST00000312481 GOLGA8FQ08AF8 430 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 GOLGA8DPQ0D2H9 430 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 MESDQ14696 234 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 INPP5DQ92835 1189 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 RNF34Q969K3 372 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 ACAP3Q96P50 834 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 ASB2Q96Q27 587 aa9.33□□□□□ -0.92
COL6A5-202ENST00000312481 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL6A5-202ENST00000312481 CLUHO75153 1309 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 SNAPC5O75971 98 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 BTDP43251 543 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 PHKA1P46020 1223 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 WASHC2DQ5SRD0 308 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 ZC3H18Q86VM9 953 aaKnown RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 C17orf53Q8N3J3 647 aaPredicted RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 DNAJC12Q9UKB3 198 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 TXNDC9O14530 226 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 RFC1P35251 1148 aaPredicted RBP9.32□□□□□ -0.92
COL6A5-202ENST00000312481 DNAJC3Q13217 504 aa9.32□□□□□ -0.92
COL6A5-202ENST00000312481 DUOXA2Q1HG44 320 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms