RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 CNPY4Q8N129 248 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 CNOT6LQ96LI5 555 aaKnown RBP5.36□□□□□ -1.55
CAST-201ENST00000309190 NUDT5Q9UKK9 219 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 VAV3Q9UKW4 847 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.36□□□□□ -1.55
CAST-201ENST00000309190 COL4A3BPQ9Y5P4 624 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 UBIAD1Q9Y5Z9 338 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 ARID2Q68CP9 1835 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 KIF2AO00139 706 aaPredicted RBP5.36□□□□□ -1.55
CAST-201ENST00000309190 NPTXRO95502 500 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 BMP15O95972 392 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 FGFR1P11362 822 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 ZNF16P17020 682 aaPredicted RBP5.36□□□□□ -1.55
CAST-201ENST00000309190 ACAT1P24752 427 aaKnown RBP5.36□□□□□ -1.55
CAST-201ENST00000309190 HNRNPH2P55795 449 aaKnown RBP5.36□□□□□ -1.55
CAST-201ENST00000309190 LAMTOR4Q0VGL1 99 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 ITGA7Q13683 1181 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 MFSD10Q14728 455 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 MTF1Q14872 753 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 TSR1Q2NL82 804 aaKnown RBP5.36□□□□□ -1.55
CAST-201ENST00000309190 SH3D19Q5HYK7 790 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 ZNF697Q5TEC3 545 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 GDF6Q6KF10 455 aaPredicted RBP5.36□□□□□ -1.55
CAST-201ENST00000309190 TAPT1Q6NXT6 567 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 TMEM40Q8WWA1 233 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 AUTS2Q8WXX7 1259 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 FGD4Q96M96 766 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 PNKPQ96T60 521 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 PCYT2Q99447 389 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 APBA2Q99767 749 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 TSG101Q99816 390 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 NT5C3AQ9H0P0 336 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 SNTG2Q9NY99 539 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 ADGRA3Q8IWK6 1321 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 PASKQ96RG2 1323 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 KCNJ18B7U540 433 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 SYF2O95926 243 aaKnown RBP5.36□□□□□ -1.55
CAST-201ENST00000309190 SLC9A1P19634 815 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 RAP1GAPP47736 663 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 TRAPPC10P48553 1259 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 CLK2P49760 499 aaKnown RBP5.36□□□□□ -1.55
CAST-201ENST00000309190 MAP3K10Q02779 954 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 KCNJ12Q14500 433 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 HIC1Q14526 733 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 MAPK6Q16659 721 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 TRIM60Q495X7 471 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 WDR93Q6P2C0 686 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 ABI1Q8IZP0 508 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 CCDC33Q8N5R6 958 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 CCDC112Q8NEF3 446 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 MTMR8Q96EF0 704 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 GAD1Q99259 594 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 HSD17B14Q9BPX1 270 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 GLT8D2Q9H1C3 349 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 SMARCAD1Q9H4L7 1026 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 ATP6V0A4Q9HBG4 840 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 KCNMB3Q9NPA1 279 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 BPTFQ12830 3046 aa5.36□□□□□ -1.55
CAST-201ENST00000309190 SPATA31C2B4DYI2 1134 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 AGPSO00116 658 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 CETN3O15182 167 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 INHBEP58166 350 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 ARHGAP1Q07960 439 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 PRPF4BQ13523 1007 aaKnown RBP5.35□□□□□ -1.55
CAST-201ENST00000309190 FILIP1LQ4L180 1135 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 XKR3Q5GH77 459 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 IGSF22Q8N9C0 903 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 DBF4BQ8NFT6 615 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 EIF2AQ9BY44 585 aaKnown RBP5.35□□□□□ -1.55
CAST-201ENST00000309190 IRX2Q9BZI1 471 aaPredicted RBP5.35□□□□□ -1.55
CAST-201ENST00000309190 SEMA6BQ9H3T3 888 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 NXF3Q9H4D5 531 aaKnown RBP5.35□□□□□ -1.55
CAST-201ENST00000309190 FAM49BQ9NUQ9 324 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 GJD2Q9UKL4 321 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 FRMD4BQ9Y2L6 1034 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 NBASA2RRP1 2371 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 GRIN2DO15399 1336 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 SIP14410 1827 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 USP34Q70CQ2 3546 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 GRAP2O75791 330 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 MMP3P08254 477 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 CSF2RAP15509 400 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 WDR72Q3MJ13 1102 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 CT47A1Q5JQC4 288 aaPredicted RBP5.35□□□□□ -1.55
CAST-201ENST00000309190 CTU1Q7Z7A3 348 aaKnown RBP5.35□□□□□ -1.55
CAST-201ENST00000309190 SCFD1Q8WVM8 642 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 PBXIP1Q96AQ6 731 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 ZNF653Q96CK0 615 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 CDHR1Q96JP9 859 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 ADAM2Q99965 735 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 TUBGCP2Q9BSJ2 902 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 XPNPEP1Q9NQW7 623 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 MYO1AQ9UBC5 1043 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 ARMCX3Q9UH62 379 aaPredicted RBP5.35□□□□□ -1.55
CAST-201ENST00000309190 PSME4Q14997 1843 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 ESYT2A0FGR8 921 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 ALDH1A1P00352 501 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 PRKCBP05771 671 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 IQCF3P0C7M6 154 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 KRT13P13646 458 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms