RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 EDC3Q96F86 508 aaKnown RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 CDX2Q99626 313 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 GPR20Q99678 358 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 SENP6Q9GZR1 1112 aaPredicted RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 CLSTN2Q9H4D0 955 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 LUC7LQ9NQ29 371 aaKnown RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 TMOD4Q9NZQ9 345 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 LRP2BPQ9P2M1 347 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 TJP2Q9UDY2 1190 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 DBNLQ9UJU6 430 aaKnown RBP5.59□□□□□ -1.51
CKS1B-201ENST00000308987 RABGAP1Q9Y3P9 1069 aa5.59□□□□□ -1.51
CKS1B-201ENST00000308987 TET1Q8NFU7 2136 aa5.59□□□□□ -1.52
CKS1B-201ENST00000308987 VPS37CA5D8V6 355 aaPredicted RBP5.58□□□□□ -1.52
CKS1B-201ENST00000308987 TRIM43BA6NCK2 446 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 SLC15A5A6NIM6 579 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 HRKO00198 91 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 UQCRFS1P1P0C7P4 283 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 VCAM1P19320 739 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 RBM10P98175 930 aaKnown RBP5.58□□□□□ -1.52
CKS1B-201ENST00000308987 GABPAQ06546 454 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 PDE4BQ07343 736 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 ST3GAL1Q11201 340 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 ADCK5Q3MIX3 580 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 TNNI3KQ59H18 835 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 PRAMEF19Q5SWL8 479 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 GORABQ5T7V8 394 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 GIMAP6Q6P9H5 292 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 SARM1Q6SZW1 724 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 LBX2Q6XYB7 198 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 NLRX1Q86UT6 975 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 PLA2G4DQ86XP0 818 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 MRPL41Q8IXM3 137 aaKnown RBP5.58□□□□□ -1.52
CKS1B-201ENST00000308987 FBXL16Q8N461 479 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 PDCL2Q8N4E4 241 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 MIGA1Q8NAN2 632 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 USP38Q8NB14 1042 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 LPAR1Q92633 364 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 GAL3ST3Q96A11 431 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 TRIM43Q96BQ3 446 aaPredicted RBP5.58□□□□□ -1.52
CKS1B-201ENST00000308987 EAF2Q96CJ1 260 aaPredicted RBP5.58□□□□□ -1.52
CKS1B-201ENST00000308987 PKNOX2Q96KN3 472 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 SPATA32Q96LK8 384 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 TNMDQ9H2S6 317 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 DHX36Q9H2U1 1008 aaKnown RBP5.58□□□□□ -1.52
CKS1B-201ENST00000308987 TTC12Q9H892 705 aaPredicted RBP5.58□□□□□ -1.52
CKS1B-201ENST00000308987 GPR108Q9NPR9 543 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 KCND1Q9NSA2 647 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 GINM1Q9NU53 330 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 DDX20Q9UHI6 824 aaKnown RBP5.58□□□□□ -1.52
CKS1B-201ENST00000308987 CFAP45Q9UL16 551 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 KCNH3Q9ULD8 1083 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 TPCN1Q9ULQ1 816 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 CEP131Q9UPN4 1083 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 PCDHB5Q9Y5E4 795 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 MRVI1Q9Y6F6 885 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 FPGT-TNNI3KV9GXZ4 949 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 SCN5AQ14524 2016 aa5.58□□□□□ -1.52
CKS1B-201ENST00000308987 TRIP12Q14669 1992 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 PTPRSQ13332 1948 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 SMTNL1A8MU46 457 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 DNM1LO00429 736 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 PRICKLE3O43900 615 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 EFEMP2O95967 443 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 TUBB4AP04350 444 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 VIPR1P32241 457 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 ZNF75DP51815 510 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 DUSP4Q13115 394 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 RESTQ13127 1097 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 TOB2Q14106 344 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 SEPT2Q15019 361 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 TRIM60Q495X7 471 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 TTC39AQ5SRH9 613 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 CNKSR3Q6P9H4 555 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 SLC39A5Q6ZMH5 540 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 SV2BQ7L1I2 683 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 CRACR2BQ8N4Y2 399 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 DTWD2Q8NBA8 298 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 SMARCC2Q8TAQ2 1214 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 LEO1Q8WVC0 666 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 LINC01599Q8WXQ3 324 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 ANKRD7Q92527 254 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 BADQ92934 168 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 GTF3C6Q969F1 213 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 CRELD1Q96HD1 420 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 MRFAP1L1Q96HT8 127 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 TMEM87BQ96K49 555 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 ZNF512BQ96KM6 892 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 FEZ1Q99689 392 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 RIOK1Q9BRS2 568 aaKnown RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 FSD1Q9BTV5 496 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 MOV10L1Q9BXT6 1211 aaKnown RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 AGXT2Q9BYV1 514 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 GTPBP4Q9BZE4 634 aaKnown RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 KIAA1683Q9H0B3 1180 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 CCDC8Q9H0W5 538 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 MIR1-1HGQ9H1L0 117 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 RPAP3Q9H6T3 665 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-201ENST00000308987 PDLIM7Q9NR12 457 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 RCOR1Q9UKL0 485 aa5.57□□□□□ -1.52
CKS1B-201ENST00000308987 ATP11BQ9Y2G3 1177 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms