RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 ABI1Q8IZP0 508 aa16.22■□□□□ 0.19
LEMD3-201ENST00000308330 NEDD1Q8NHV4 660 aa16.22■□□□□ 0.19
LEMD3-201ENST00000308330 ANO3Q9BYT9 981 aa16.22■□□□□ 0.19
LEMD3-201ENST00000308330 DEFB129Q9H1M3 183 aa16.22■□□□□ 0.19
LEMD3-201ENST00000308330 DCLRE1BQ9H816 532 aa16.22■□□□□ 0.19
LEMD3-201ENST00000308330 PANK4Q9NVE7 773 aa16.22■□□□□ 0.19
LEMD3-201ENST00000308330 ZBTB5O15062 677 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 MARK3P27448 753 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 FBXO33Q7Z6M2 555 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 STMN3Q9NZ72 180 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 CROTQ9UKG9 612 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 ADGRG1Q9Y653 693 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 SMNDC1O75940 238 aaKnown RBP eCLIP16.21■□□□□ 0.19
LEMD3-201ENST00000308330 NPTXRO95502 500 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 SRGNP10124 158 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 FOSL1P15407 271 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 ZNF24P17028 368 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 EEF1B2P24534 225 aaKnown RBP16.21■□□□□ 0.19
LEMD3-201ENST00000308330 YARSP54577 528 aaKnown RBP16.21■□□□□ 0.19
LEMD3-201ENST00000308330 GRIN1Q05586 938 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 ALX1Q15699 326 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 C6orf183Q5T699 404 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 C12orf60Q5U649 245 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 KCNV1Q6PIU1 500 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 FASTKD5Q7L8L6 764 aaKnown RBP16.21■□□□□ 0.19
LEMD3-201ENST00000308330 PEX26Q7Z412 305 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 GJA10Q969M2 543 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 FEM1BQ9UK73 627 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 NEDD4P46934 1319 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 STAT3P40763 770 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 TGFB2P61812 414 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 ZNF827Q17R98 1081 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 CDC42EP5Q6NZY7 148 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 SCAIQ8N9R8 606 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.21■□□□□ 0.19
LEMD3-201ENST00000308330 ZFAND2BQ8WV99 257 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 EEF2KMTQ96G04 330 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 LBHD1Q9BQE6 289 aaPredicted RBP16.21■□□□□ 0.19
LEMD3-201ENST00000308330 ANKFY1Q9P2R3 1169 aa16.21■□□□□ 0.19
LEMD3-201ENST00000308330 HBS1LQ9Y450 684 aaKnown RBP16.21■□□□□ 0.19
LEMD3-201ENST00000308330 USP17L15C9J2P7 530 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 USP17L11C9JVI0 530 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 USP17L18D6R9N7 530 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 USP17L22D6RA61 530 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 USP17L19D6RCP7 530 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 USP17L20D6RJB6 530 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 MATN2O00339 956 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 HNRNPDLO14979 420 aaKnown RBP16.21■□□□□ 0.18
LEMD3-201ENST00000308330 PLSCR1O15162 318 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 HAUS5O94927 633 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 PRLP01236 227 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 USP17L24Q0WX57 530 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 STK4Q13043 487 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 USP17L6PQ6QN14 398 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 HHIPL2Q6UWX4 724 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 VPS37AQ8NEZ2 397 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 ATXN2Q99700 1313 aaKnown RBP16.21■□□□□ 0.18
LEMD3-201ENST00000308330 TRIM56Q9BRZ2 755 aaKnown RBP16.21■□□□□ 0.18
LEMD3-201ENST00000308330 KRT82Q9NSB4 513 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 ARHGAP23Q9P227 1491 aa16.21■□□□□ 0.18
LEMD3-201ENST00000308330 SLIT1O75093 1534 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 MMP1P03956 469 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 DLATP10515 647 aaKnown RBP16.2■□□□□ 0.18
LEMD3-201ENST00000308330 ATP6V1B1P15313 513 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 DSG1Q02413 1049 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 TAF1CQ15572 869 aaPredicted RBP16.2■□□□□ 0.18
LEMD3-201ENST00000308330 CAPSLQ8WWF8 208 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 ZIM3Q96PE6 472 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 IRX2Q9BZI1 471 aaPredicted RBP16.2■□□□□ 0.18
LEMD3-201ENST00000308330 MYOZ2Q9NPC6 264 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 ZMYND8Q9ULU4 1186 aaPredicted RBP16.2■□□□□ 0.18
LEMD3-201ENST00000308330 MTERF2Q49AM1 385 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 SAMD3Q8N6K7 520 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 DDI1Q8WTU0 396 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 GRAMD1AQ96CP6 724 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 ANKRD36BP1Q96IX9 119 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 YIPF2Q9BWQ6 316 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 METTL14Q9HCE5 456 aaKnown RBP16.2■□□□□ 0.18
LEMD3-201ENST00000308330 MEIS1O00470 390 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 BUB1O43683 1085 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 TFDP1Q14186 410 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 ITIH4Q14624 930 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 SLC39A14Q15043 492 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 ARHGAP44Q17R89 818 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 C15orf59Q2T9L4 293 aaPredicted RBP16.2■□□□□ 0.18
LEMD3-201ENST00000308330 VWA3BQ502W6 1294 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 MTHFD1LQ6UB35 978 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 B3GNT6Q6ZMB0 384 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 HEATR4Q86WZ0 1026 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 NOA1Q8NC60 698 aaKnown RBP16.2■□□□□ 0.18
LEMD3-201ENST00000308330 EHD4Q9H223 541 aa16.2■□□□□ 0.18
LEMD3-201ENST00000308330 GOLGA8QA0A0J9YX86 632 aa16.19■□□□□ 0.18
LEMD3-201ENST00000308330 GOLGA8OA6NCC3 632 aa16.19■□□□□ 0.18
LEMD3-201ENST00000308330 GOLGA8NF8WBI6 632 aa16.19■□□□□ 0.18
LEMD3-201ENST00000308330 ASPHQ12797 758 aa16.19■□□□□ 0.18
LEMD3-201ENST00000308330 CYB5R4Q7L1T6 521 aa16.19■□□□□ 0.18
LEMD3-201ENST00000308330 CCDC84Q86UT8 332 aaPredicted RBP16.19■□□□□ 0.18
LEMD3-201ENST00000308330 C11orf74Q86VG3 221 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms