RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 APBB1IPQ7Z5R6 666 aaPredicted RBP29.13■■■□□ 2.25
CDKN2A-201ENST00000304494 COLGALT2Q8IYK4 626 aa29.13■■■□□ 2.25
CDKN2A-201ENST00000304494 DAW1Q8N136 415 aa29.13■■■□□ 2.25
CDKN2A-201ENST00000304494 SMRP1Q8NCR6 262 aa29.13■■■□□ 2.25
CDKN2A-201ENST00000304494 PLIN2Q99541 437 aa29.13■■■□□ 2.25
CDKN2A-201ENST00000304494 RBM19Q9Y4C8 960 aaKnown RBP29.13■■■□□ 2.25
CDKN2A-201ENST00000304494 DSC1Q08554 894 aa29.12■■■□□ 2.25
CDKN2A-201ENST00000304494 KCNC3Q14003 757 aa29.12■■■□□ 2.25
CDKN2A-201ENST00000304494 DCAF4L1Q3SXM0 396 aa29.12■■■□□ 2.25
CDKN2A-201ENST00000304494 GJD3Q8N144 294 aa29.12■■■□□ 2.25
CDKN2A-201ENST00000304494 TMEM87AQ8NBN3 555 aa29.12■■■□□ 2.25
CDKN2A-201ENST00000304494 VN1R2Q8NFZ6 395 aa29.12■■■□□ 2.25
CDKN2A-201ENST00000304494 SNX21Q969T3 373 aa29.12■■■□□ 2.25
CDKN2A-201ENST00000304494 RPS6KC1Q96S38 1066 aa29.12■■■□□ 2.25
CDKN2A-201ENST00000304494 KMT5AQ9NQR1 393 aa29.12■■■□□ 2.25
CDKN2A-201ENST00000304494 IRAK3Q9Y616 596 aa29.12■■■□□ 2.25
CDKN2A-201ENST00000304494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 PLA2G4BP0C869 781 aa29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 SSTR3P32745 418 aaPredicted RBP29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 OR1G1P47890 313 aa29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 SLC12A3P55017 1021 aa29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 GRIK3Q13003 919 aa29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 RESTQ13127 1097 aa29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 MAPK7Q13164 816 aa29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 ADHFE1Q8IWW8 467 aa29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 TMEM134Q9H6X4 195 aa29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 FOXD4L1Q9NU39 408 aa29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 MIOSQ9NXC5 875 aa29.11■■■□□ 2.25
CDKN2A-201ENST00000304494 ATF7IP2Q5U623 682 aa29.1■■■□□ 2.25
CDKN2A-201ENST00000304494 GSTCDQ8NEC7 633 aa29.1■■■□□ 2.25
CDKN2A-201ENST00000304494 RASSF8Q8NHQ8 419 aa29.1■■■□□ 2.25
CDKN2A-201ENST00000304494 CASP10Q92851 521 aa29.1■■■□□ 2.25
CDKN2A-201ENST00000304494 POP1Q99575 1024 aaKnown RBP29.1■■■□□ 2.25
CDKN2A-201ENST00000304494 KLK14Q9P0G3 267 aa29.1■■■□□ 2.25
CDKN2A-201ENST00000304494 ARHGAP28Q9P2N2 729 aa29.1■■■□□ 2.25
CDKN2A-201ENST00000304494 EDN1P05305 212 aa29.09■■■□□ 2.25
CDKN2A-201ENST00000304494 RBM10P98175 930 aaKnown RBP29.09■■■□□ 2.25
CDKN2A-201ENST00000304494 ZP2Q05996 745 aa29.09■■■□□ 2.25
CDKN2A-201ENST00000304494 NT5DC1Q5TFE4 455 aa29.09■■■□□ 2.25
CDKN2A-201ENST00000304494 LLGL2Q6P1M3 1020 aa29.09■■■□□ 2.25
CDKN2A-201ENST00000304494 COLEC11Q9BWP8 271 aa29.09■■■□□ 2.25
CDKN2A-201ENST00000304494 SNTG2Q9NY99 539 aa29.09■■■□□ 2.25
CDKN2A-201ENST00000304494 USP20Q9Y2K6 914 aa29.09■■■□□ 2.25
CDKN2A-201ENST00000304494 PRG3Q9Y2Y8 225 aaPredicted RBP29.09■■■□□ 2.25
CDKN2A-201ENST00000304494 BDP1A6H8Y1 2624 aa29.09■■■□□ 2.25
CDKN2A-201ENST00000304494 CLASP2O75122 1294 aaKnown RBP29.08■■■□□ 2.25
CDKN2A-201ENST00000304494 ANKRD54Q6NXT1 300 aa29.08■■■□□ 2.25
CDKN2A-201ENST00000304494 NTPCRQ9BSD7 190 aaKnown RBP29.08■■■□□ 2.25
CDKN2A-201ENST00000304494 VN1R3Q9BXE9 311 aa29.08■■■□□ 2.25
CDKN2A-201ENST00000304494 ZSCAN16Q9H4T2 348 aaPredicted RBP29.08■■■□□ 2.25
CDKN2A-201ENST00000304494 CD320Q9NPF0 282 aa29.08■■■□□ 2.25
CDKN2A-201ENST00000304494 MTMR6Q9Y217 621 aa29.08■■■□□ 2.25
CDKN2A-201ENST00000304494 TNFSF13BQ9Y275 285 aa29.08■■■□□ 2.25
CDKN2A-201ENST00000304494 HCFC2Q9Y5Z7 792 aa29.08■■■□□ 2.25
CDKN2A-201ENST00000304494 CLIC4Q9Y696 253 aa29.08■■■□□ 2.25
CDKN2A-201ENST00000304494 STX6O43752 255 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 PLS3P13797 630 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 HOXB8P17481 243 aaPredicted RBP29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 SMTNP53814 917 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 GRIN1Q05586 938 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 RAD51AP2Q09MP3 1159 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 EEF1DP3Q658K8 133 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 HSCBQ8IWL3 235 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 SPIRE2Q8WWL2 714 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 AUTS2Q8WXX7 1259 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 MRPL4Q9BYD3 311 aaKnown RBP29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 MARCH5Q9NX47 278 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 SSX2IPQ9Y2D8 614 aa29.07■■■□□ 2.24
CDKN2A-201ENST00000304494 SFI1A8K8P3 1242 aa29.06■■■□□ 2.24
CDKN2A-201ENST00000304494 RECQL4O94761 1208 aa29.06■■■□□ 2.24
CDKN2A-201ENST00000304494 SOD2P04179 222 aa29.06■■■□□ 2.24
CDKN2A-201ENST00000304494 PTPAQ15257 358 aa29.06■■■□□ 2.24
CDKN2A-201ENST00000304494 PTPN14Q15678 1187 aa29.06■■■□□ 2.24
CDKN2A-201ENST00000304494 EMILIN2Q9BXX0 1053 aa29.06■■■□□ 2.24
CDKN2A-201ENST00000304494 MRPL17Q9NRX2 175 aaKnown RBP29.06■■■□□ 2.24
CDKN2A-201ENST00000304494 USP15Q9Y4E8 981 aaPredicted RBP29.06■■■□□ 2.24
CDKN2A-201ENST00000304494 NCOR1O75376 2440 aa29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 TDRD15B5MCY1 1934 aaKnown RBP29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 C19orf67A6NJJ6 358 aa29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 SLC16A4O15374 487 aa29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 STRN3Q13033 797 aa29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 TPRNQ4KMQ1 711 aa29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 PPFIBP1Q86W92 1011 aa29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 ACO2Q99798 780 aaKnown RBP29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 HERC2P3Q9BVR0 1158 aa29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 CCSER1Q9C0I3 900 aa29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 LARSQ9P2J5 1176 aaKnown RBP29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 ODF2LQ9ULJ1 636 aa29.05■■■□□ 2.24
CDKN2A-201ENST00000304494 URODP06132 367 aa29.04■■■□□ 2.24
CDKN2A-201ENST00000304494 THP07101 528 aa29.04■■■□□ 2.24
CDKN2A-201ENST00000304494 PLCG1P19174 1290 aa29.04■■■□□ 2.24
CDKN2A-201ENST00000304494 TUSC3Q13454 348 aa29.04■■■□□ 2.24
CDKN2A-201ENST00000304494 KARSQ15046 597 aaKnown RBP29.04■■■□□ 2.24
CDKN2A-201ENST00000304494 GDAQ9Y2T3 454 aa29.04■■■□□ 2.24
CDKN2A-201ENST00000304494 SRPRBQ9Y5M8 271 aaKnown RBP29.04■■■□□ 2.24
CDKN2A-201ENST00000304494 H0YCG3 227 aa29.03■■■□□ 2.24
CDKN2A-201ENST00000304494 ZNF568Q3ZCX4 644 aa29.03■■■□□ 2.24
CDKN2A-201ENST00000304494 ARSHQ5FYA8 562 aa29.03■■■□□ 2.24
CDKN2A-201ENST00000304494 FAM173BQ6P4H8 233 aa29.03■■■□□ 2.24
CDKN2A-201ENST00000304494 TAS1R3Q7RTX0 852 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms