RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 MYCBPAPQ8TBZ2 947 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ZNF473Q8WTR7 871 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 PGBD1Q96JS3 809 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 FAM227BQ96M60 508 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 EYA1Q99502 592 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 MMTAG2Q9BU76 263 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 MYLK2Q9H1R3 596 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 STMN3Q9NZ72 180 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ZFP69BQ9UJL9 534 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 SHOC2Q9UQ13 582 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 GAKO14976 1311 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 CAPN9O14815 690 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 FKBP9O95302 570 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 MT-ND3P03897 115 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 GGCXP38435 758 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 TUFMP49411 452 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 STAG2Q8N3U4 1231 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 WDR48Q8TAF3 677 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 PPP1R14AQ96A00 147 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ASB2Q96Q27 587 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ANO3Q9BYT9 981 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 DHX33Q9H6R0 707 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 PSMC3IPQ9P2W1 217 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 MRPL11Q9Y3B7 192 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 MST1RQ04912 1400 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 CDK7P50613 346 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 PAPOLAP51003 745 aaKnown RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 PMS2P54278 862 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 MFSD5Q6N075 450 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 ZBTB38Q8NAP3 1195 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 PPHLN1Q8NEY8 458 aaKnown RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 AENQ8WTP8 325 aaKnown RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 JARID2Q92833 1246 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 UTP6Q9NYH9 597 aaKnown RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 PLAAQ9Y263 795 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 ZNF609O15014 1411 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 DCCP43146 1447 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 FAM25AB3EWG3 89 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 FAM25CB3EWG5 89 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 FAM25GB3EWG6 89 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 IL2RBP14784 551 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 ZNF18P17022 549 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 ECE1P42892 770 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 RBL2Q08999 1139 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 TCIRG1Q13488 830 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 MEA1Q16626 185 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 KLHL24Q6TFL4 600 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 MPRIPQ6WCQ1 1025 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 NANOGNBQ7Z5D8 188 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 MB21D2Q8IYB1 491 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 KATNAL1Q9BW62 490 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 ATAD3AQ9NVI7 634 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 PKD2L2Q9NZM6 624 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 LEMD3Q9Y2U8 911 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 H0Y626 953 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 PEX14O75381 377 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 UFL1O94874 794 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 TRIM16O95361 564 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 GSCP56915 257 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 BFSP1Q12934 665 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 NAB2Q15742 525 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 TRIM71Q2Q1W2 868 aaKnown RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 ITPRIPL1Q6GPH6 555 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 COPS6Q7L5N1 327 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 SCYL3Q8IZE3 742 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 RNF169Q8NCN4 708 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 C19orf60Q96EN9 201 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 DACH2Q96NX9 599 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 DCDC2Q9UHG0 476 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 PHF11Q9UIL8 331 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 SFNP31947 248 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 IL6STP40189 918 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 AP1S2P56377 157 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 TFCP2Q12800 502 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 ADAM9Q13443 819 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 PRKG1Q13976 671 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 HIC1Q14526 733 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 GNPTABQ3T906 1256 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 ADSSL1Q8N142 457 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 CHCHD4Q8N4Q1 142 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 SYMPKQ92797 1274 aaKnown RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 XAGE2Q96GT9 111 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 CNBD2Q96M20 576 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 IARS2Q9NSE4 1012 aaKnown RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 FESP07332 822 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 THOC5Q13769 683 aaKnown RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 WLSQ5T9L3 541 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 TYW1BQ6NUM6 668 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 ANGPTL8Q6UXH0 198 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 CDKL3Q8IVW4 592 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 RYBPQ8N488 228 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 FLAD1Q8NFF5 587 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 EZH1Q92800 747 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 MAGOHBQ96A72 148 aaKnown RBP5.54□□□□□ -1.52
SCN1A-201ENST00000303395 ACCSQ96QU6 501 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 GINS4Q9BRT9 223 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 VPS16Q9H269 839 aa5.54□□□□□ -1.52
SCN1A-201ENST00000303395 EHD1Q9H4M9 534 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms