RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZFYVE19Q96K21 471 aa14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SMARCA1P28370 1054 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ARFIP2P53365 341 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SESN2P58004 480 aaPredicted RBP14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SCG3Q8WXD2 468 aaKnown RBP14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 BARHL2Q9NY43 387 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MYO5CQ9NQX4 1742 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KCNN4O15554 427 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GPD1LQ8N335 351 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TMEM143Q96AN5 459 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PLEKHG1Q9ULL1 1385 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CLASP1Q7Z460 1538 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 F5H6K3 240 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ENO1P06733 434 aaKnown RBP14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KLRC3Q07444 240 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 EFHC2Q5JST6 749 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MCPH1Q8NEM0 835 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PGBD4Q96DM1 585 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MRPL4Q9BYD3 311 aaKnown RBP14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CYP26B1Q9NR63 512 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 AURKCQ9UQB9 309 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GNAT1P11488 350 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ACOT2P49753 483 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NLRP11P59045 1033 aaKnown RBP14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SYNDIG1Q9H7V2 258 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 POLRMTO00411 1230 aaKnown RBP14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 P4HBP07237 508 aaKnown RBP14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CTSHP09668 335 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KCNA2P16389 499 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 LRRC36Q1X8D7 754 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NAALADL2Q58DX5 795 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 LRRC37BQ96QE4 947 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TRIM51Q9BSJ1 452 aa14.38□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GMNCA6NCL1 334 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TTLL4Q14679 1199 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GRAMD4Q6IC98 578 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 RBM46Q8TBY0 533 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NEUROG2Q9H2A3 272 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 RNF181Q9P0P0 153 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 AGO2Q9UKV8 859 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KIF1BO60333 1816 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 APOL1O14791 398 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GRAP2O75791 330 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 BCAR1P56945 870 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TFDP2Q14188 446 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PID1Q7Z2X4 250 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 DDX53Q86TM3 631 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ARHGEF1Q92888 912 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 AXIN2Q9Y2T1 843 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MTMR2Q13614 643 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CHRNA5P30532 468 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KDSRQ06136 332 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NUP93Q8N1F7 819 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 RNF149Q8NC42 400 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 YIPF2Q9BWQ6 316 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ELP3Q9H9T3 547 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 CHORDC1Q9UHD1 332 aaPredicted RBP14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GSG1L2A8MUP6 293 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 YWHABP31946 246 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 LRRC23Q53EV4 343 aaPredicted RBP14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 C11orf74Q86VG3 221 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SRBD1Q8N5C6 995 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 IRX2Q9BZI1 471 aaPredicted RBP14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TBC1D22BQ9NU19 505 aa14.37□□□□□ -0.11
CHRFAM7A-201ENST00000299847 AARSP49588 968 aaKnown RBP eCLIP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KLK7P49862 253 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 EIF3EP60228 445 aaKnown RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SKIV2LQ15477 1246 aaKnown RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 LONRF1Q17RB8 773 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NAF1Q96HR8 494 aaKnown RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 OSBPL1AQ9BXW6 950 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 DBR1Q9UK59 544 aaKnown RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TRIM33Q9UPN9 1127 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MRFAP1Q9Y605 127 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MAGI3Q5TCQ9 1506 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MIF4GDA9UHW6 222 aaKnown RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 KCNQ2O43526 872 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PTK2BQ14289 1009 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PRAMEF18Q5VWM3 479 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PROM2Q8N271 834 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TTC13Q8NBP0 860 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 FAM167AQ96KS9 214 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 LRRC1Q9BTT6 524 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MARCOQ9UEW3 520 aaPredicted RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PIN4Q9Y237 131 aaKnown RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 FAM95CA0A1B0GW59 222 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TYK2P29597 1187 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 RAD23BP54727 409 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 HMGCS2P54868 508 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 PCSK7Q16549 785 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 BTBD8Q5XKL5 378 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 GIMAP8Q8ND71 665 aaPredicted RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 TEKT4Q8WW24 435 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 SLC7A5P2Q9GIP4 190 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ETNK1Q9HBU6 452 aa14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 LIMA1Q9UHB6 759 aaKnown RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 MEFVO15553 781 aaPredicted RBP14.36□□□□□ -0.11
CHRFAM7A-201ENST00000299847 ATMINO43313 823 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms