RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 STAT1P42224 750 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 FMO5P49326 533 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 AADACL2Q6P093 401 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 NT5DC3Q86UY8 548 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 MICALL2Q8IY33 904 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 PBKQ96KB5 322 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 NMRK2Q9NPI5 230 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 FBXO28Q9NVF7 368 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 GGT7Q9UJ14 662 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 DICER1Q9UPY3 1922 aaKnown RBP16.75■□□□□ 0.27
UBAP1-201ENST00000297661 A8MUI8 341 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 SLC16A3O15427 465 aaKnown RBP16.75■□□□□ 0.27
UBAP1-201ENST00000297661 FGGP02679 453 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 VIMP08670 466 aaKnown RBP16.75■□□□□ 0.27
UBAP1-201ENST00000297661 VIL1P09327 827 aaKnown RBP16.75■□□□□ 0.27
UBAP1-201ENST00000297661 LINGO3P0C6S8 592 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 RARAP10276 462 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 STAT2P52630 851 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 C10orf76Q5T2E6 689 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 DPY19L2Q6NUT2 758 aa16.75■□□□□ 0.27
UBAP1-201ENST00000297661 ASTN2O75129 1339 aaPredicted RBP16.74■□□□□ 0.27
UBAP1-201ENST00000297661 BTNL10A8MVZ5 291 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 IGF2BP3O00425 579 aaKnown RBP eCLIP16.74■□□□□ 0.27
UBAP1-201ENST00000297661 SOX5P35711 763 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 ABL2P42684 1182 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 EIF3BP55884 814 aaKnown RBP16.74■□□□□ 0.27
UBAP1-201ENST00000297661 DLG4P78352 724 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 FAM43BQ6ZT52 329 aaPredicted RBP16.74■□□□□ 0.27
UBAP1-201ENST00000297661 FIZ1Q96SL8 496 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 UNC45AQ9H3U1 944 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 ECT2Q9H8V3 914 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.74■□□□□ 0.27
UBAP1-201ENST00000297661 OLFML3Q9NRN5 406 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 CPSF2Q9P2I0 782 aaKnown RBP16.74■□□□□ 0.27
UBAP1-201ENST00000297661 CNOT7Q9UIV1 285 aaKnown RBP16.74■□□□□ 0.27
UBAP1-201ENST00000297661 ZBTB21Q9ULJ3 1066 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 NENFQ9UMX5 172 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 PSMD10O75832 226 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 POTEJP0CG39 1038 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 MMP13P45452 471 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 SNX1Q13596 522 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 IFI16Q16666 785 aaKnown RBP16.74■□□□□ 0.27
UBAP1-201ENST00000297661 ANKRD20A2Q5SQ80 823 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 ANKRD20A1Q5TYW2 823 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 ANKRD20A3Q5VUR7 823 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 DLK2Q6UY11 383 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 HOOK3Q86VS8 718 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 ZSWIM2Q8NEG5 633 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 ELMO3Q96BJ8 720 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 PRMT1Q99873 361 aaKnown RBP16.74■□□□□ 0.27
UBAP1-201ENST00000297661 GPR88Q9GZN0 384 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 THAP2Q9H0W7 228 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 ADAM7Q9H2U9 754 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 RRAGCQ9HB90 399 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 AGPAT3Q9NRZ7 376 aa16.74■□□□□ 0.27
UBAP1-201ENST00000297661 ATAD5Q96QE3 1844 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 A6NHS1 94 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 EIF4E1BA6NMX2 242 aaKnown RBP16.73■□□□□ 0.27
UBAP1-201ENST00000297661 TNIP1Q15025 636 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 DCAF12L1Q5VU92 463 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 ZNF746Q6NUN9 644 aaPredicted RBP16.73■□□□□ 0.27
UBAP1-201ENST00000297661 ZNF720Q7Z2F6 126 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 SYCP3Q8IZU3 236 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 SLC20A1Q8WUM9 679 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 INTS2Q9H0H0 1204 aaKnown RBP16.73■□□□□ 0.27
UBAP1-201ENST00000297661 TMOD4Q9NZQ9 345 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 STXBP5LQ9Y2K9 1186 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 TMEM150BA6NC51 233 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 GLTPD2A6NH11 291 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 TMEM110-MUSTN1A8MSY1 372 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 EXOC3O60645 756 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 SHBGP04278 402 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 FERP16591 822 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 MIGA2Q7L4E1 593 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 KIF2BQ8N4N8 673 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 ZNF577Q9BSK1 485 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 GLIS2Q9BZE0 524 aaPredicted RBP16.73■□□□□ 0.27
UBAP1-201ENST00000297661 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
UBAP1-201ENST00000297661 INTS9Q9NV88 658 aaKnown RBP16.73■□□□□ 0.27
UBAP1-201ENST00000297661 TLDC2A0PJX2 215 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 CCDC188H7C350 402 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 UPP2O95045 317 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 KRT16P08779 473 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 EAPPQ56P03 285 aaPredicted RBP16.72■□□□□ 0.27
UBAP1-201ENST00000297661 PHLDB3Q6NSJ2 640 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 GPC2Q8N158 579 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 ACP6Q9NPH0 428 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 ZFATQ9P243 1243 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 STK38LQ9Y2H1 464 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 FRMD4BQ9Y2L6 1034 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 FOXN3O00409 490 aaPredicted RBP16.72■□□□□ 0.27
UBAP1-201ENST00000297661 SLC26A4O43511 780 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 PPFIA2O75334 1257 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 LUC7L3O95232 432 aaKnown RBP16.72■□□□□ 0.27
UBAP1-201ENST00000297661 FESP07332 822 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 CYP3A4P08684 503 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 POLR2MP0CAP2 368 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 ATP2A2P16615 1042 aaKnown RBP16.72■□□□□ 0.27
UBAP1-201ENST00000297661 GAP43P17677 238 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 IFNAR2P48551 515 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms