RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 H0YGN5 161 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 HNRNPDLO14979 420 aaKnown RBP14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 PHF2O75151 1096 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 TNFRSF8P28908 595 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 ATP11AP98196 1134 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 SLC5A5Q92911 643 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 CCDC17Q96LX7 622 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 TEKT3Q9BXF9 490 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 PITPNM3Q9BZ71 974 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 SIX2Q9NPC8 291 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 DONSONQ9NYP3 566 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 NFS1Q9Y697 457 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 PITPNM2Q9BZ72 1349 aa14.25□□□□□ -0.13
TNFRSF21-201ENST00000296861 CLGNO14967 610 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 KIAA0391O15091 583 aaKnown RBP14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 CHKAP35790 457 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 PSMC4P43686 418 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 PPATQ06203 517 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 SETDB1Q15047 1291 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 SEZ6Q53EL9 994 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 CD302Q8IX05 232 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 TMEM237Q96Q45 408 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 CCDC77Q9BR77 488 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 TMEM117Q9H0C3 514 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 GLT8D2Q9H1C3 349 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 CARD9Q9H257 536 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 ENO4A6NNW6 628 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 FOSP01100 380 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 GAP43P17677 238 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 ITGA8P53708 1063 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 ZNF572Q7Z3I7 529 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 YTHDF3Q7Z739 585 aaKnown RBP14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 RHOT2Q8IXI1 618 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 HES6Q96HZ4 224 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 FAM20AQ96MK3 541 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 FNBP1Q96RU3 617 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 C10orf88Q9H8K7 445 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 SAYSD1Q9NPB0 183 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 ANKFY1Q9P2R3 1169 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 CCPG1Q9ULG6 757 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 ANP32DO95626 131 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 CHRNA3P32297 505 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 FAM43BQ6ZT52 329 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 CYFIP1Q7L576 1253 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 ANKMY2Q8IV38 441 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 WDR18Q9BV38 432 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 YIPF3Q9GZM5 350 aa14.24□□□□□ -0.13
TNFRSF21-201ENST00000296861 KRT10P13645 584 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 CA4P22748 312 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 COILP38432 576 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 PRELPP51888 382 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 ELF3P78545 371 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 ORC2Q13416 577 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 PREPLQ4J6C6 727 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 ZNF720Q7Z2F6 126 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 XXYLT1Q8NBI6 393 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 ETNPPLQ8TBG4 499 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 FBF1Q8TES7 1133 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 SPDL1Q96EA4 605 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 ZSWIM1Q9BR11 485 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 UNC45AQ9H3U1 944 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 EXOC1LA0A1B0GW35 172 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 RASSF9O75901 435 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 ATP6V1G2O95670 118 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 AP3B2Q13367 1082 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 DRP2Q13474 957 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 ERMARDQ5T6L9 678 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 HHATQ5VTY9 493 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 HAUS6Q7Z4H7 955 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 NOP9Q86U38 636 aaKnown RBP14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 SLC13A5Q86YT5 568 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 SPOCK2Q92563 424 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 AGBL1Q96MI9 1066 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 FAM213AQ9BRX8 229 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 HSPBP1Q9NZL4 362 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 TARSP26639 723 aaKnown RBP14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 DDR1Q08345 913 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 DGKZQ13574 1117 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 CEP55Q53EZ4 464 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 NT5C1BQ96P26 610 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 WDR11Q9BZH6 1224 aa14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 WRAP73Q9P2S5 460 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF21-201ENST00000296861 DDX3YO15523 660 aaKnown RBP14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 RIPK2O43353 540 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 DUPD1Q68J44 220 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 SPOPLQ6IQ16 392 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 APOBEC3HQ6NTF7 200 aaKnown RBP14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 AGAP11Q8TF27 550 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 PCDHB18PQ96TA0 734 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 COA1Q9GZY4 146 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 DNAJC18Q9H819 358 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 KIF9Q9HAQ2 790 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 PARP2Q9UGN5 583 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 AGAP1Q9UPQ3 857 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 ECM29Q5VYK3 1845 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 MMP10P09238 476 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 ALDH5A1P51649 535 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 OVGP1Q12889 678 aa14.22□□□□□ -0.13
TNFRSF21-201ENST00000296861 SLMAPQ14BN4 828 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms