RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 GANQ9H2C0 597 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 BLOC1S6Q9UL45 172 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 MEIS1O00470 390 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 PSMG1O95456 288 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 STARD3NLO95772 234 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 TROVE2P10155 538 aaKnown RBP eCLIP10.87□□□□□ -0.67
CLDN1-201ENST00000295522 PON1P27169 355 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 SPARCL1Q14515 664 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 PROM2Q8N271 834 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 GRAMD1AQ96CP6 724 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 CCDC97Q96F63 343 aaPredicted RBP10.87□□□□□ -0.67
CLDN1-201ENST00000295522 ISCA1Q9BUE6 129 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 TXLNGYQ9BZA5 131 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 ANAPC5Q9UJX4 755 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 AJAP1Q9UKB5 411 aaPredicted RBP10.87□□□□□ -0.67
CLDN1-201ENST00000295522 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
CLDN1-201ENST00000295522 CLDN3O15551 220 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 BAG3O95817 575 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 GNA11P29992 359 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 PGM1P36871 562 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 SKIV2L2P42285 1042 aaKnown RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 KCNQ4P56696 695 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 SH2D4BQ5SQS7 431 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 ZNF444Q8N0Y2 327 aaPredicted RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 PRPF31Q8WWY3 499 aaKnown RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 SLC7A6OSQ96CW6 309 aaPredicted RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 SERPINB12Q96P63 405 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 PNMA5Q96PV4 448 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 SPATA16Q9BXB7 569 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 ARMCX1Q9P291 453 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 DISP2A7MBM2 1401 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 RIC1Q4ADV7 1423 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 MYH4Q9Y623 1939 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 C2orf71A6NGG8 1288 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 ARHGAP42A6NI28 874 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 WTIPA6NIX2 430 aaPredicted RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 COQ9O75208 318 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 TTLL1O95922 423 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 USP17L8P0C7I0 530 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 ATF2P15336 505 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 MTMR2Q13614 643 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 CCDC174Q6PII3 467 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 USP17L2Q6R6M4 530 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 RNF207Q6ZRF8 634 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 WDR60Q8WVS4 1066 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 PTPRN2Q92932 1015 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 FNBP1Q96RU3 617 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 HEMGNQ9BXL5 484 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 SLC37A4O43826 429 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 CCDC22O60826 627 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 CIB2O75838 187 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 OR6B1O95007 311 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 CASP4P49662 377 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 ITGA8P53708 1063 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 POU5F1Q01860 360 aaKnown RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 LIN52Q52LA3 116 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 RASSF3Q86WH2 238 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 CPNE8Q86YQ8 564 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 ARHGAP18Q8N392 663 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 SYT2Q8N9I0 419 aaPredicted RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 SLC44A5Q8NCS7 719 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 COA7Q96BR5 231 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 CADM1Q9BY67 442 aaKnown RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 ROPN1BQ9BZX4 212 aaPredicted RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 C12orf65Q9H3J6 166 aaKnown RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 ROPN1Q9HAT0 212 aaPredicted RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 FBXO6Q9NRD1 293 aaPredicted RBP10.86□□□□□ -0.67
CLDN1-201ENST00000295522 HEY2Q9UBP5 337 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 STK17AQ9UEE5 414 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 PRKAG3Q9UGI9 489 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 PNPLA7Q6ZV29 1317 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 SYNGAP1Q96PV0 1343 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 ECM29Q5VYK3 1845 aa10.86□□□□□ -0.67
CLDN1-201ENST00000295522 SFI1A8K8P3 1242 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 GCNT3O95395 438 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 OATP04181 439 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 GALK1P51570 392 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 KDSRQ06136 332 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 DRAP1Q14919 205 aaPredicted RBP10.85□□□□□ -0.67
CLDN1-201ENST00000295522 CADPS2Q86UW7 1296 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 PALB2Q86YC2 1186 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 INPP5DQ92835 1189 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 LRRC27Q9C0I9 530 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 NDE1Q9NXR1 346 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 TTC7AQ9ULT0 858 aaPredicted RBP10.85□□□□□ -0.67
CLDN1-201ENST00000295522 USP20Q9Y2K6 914 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 POTEB3A0JP26 581 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 POTECB2RU33 542 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 H3BRJ5 948 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 DDX3YO15523 660 aaKnown RBP10.85□□□□□ -0.67
CLDN1-201ENST00000295522 CDH16O75309 829 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 CSF1RP07333 972 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 PYGMP11217 842 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 ATP6V1B1P15313 513 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 COMTP21964 271 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 FUT4P22083 530 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 COILP38432 576 aaPredicted RBP10.85□□□□□ -0.67
CLDN1-201ENST00000295522 INHBCP55103 352 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 POTEBQ6S5H4 581 aa10.85□□□□□ -0.67
CLDN1-201ENST00000295522 TRMT10CQ7L0Y3 403 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms