RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CPA4Q9UI42 421 aa18.85■□□□□ 0.61
CDC42EP3-201ENST00000295324 H3BRJ5 948 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 PCSK1P29120 753 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 NME3Q13232 169 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 EXOC4Q96A65 974 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 MAGEB5Q9BZ81 275 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 RRAGDQ9NQL2 400 aaPredicted RBP18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 FOXN1O15353 648 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 NLRP11P59045 1033 aaKnown RBP18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 ZNF484Q5JVG2 852 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 MOXD1Q6UVY6 613 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 C3orf67Q6ZVT6 689 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 PDCD6IPQ8WUM4 868 aaKnown RBP18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 TJP2Q9UDY2 1190 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 LSM7Q9UK45 103 aaKnown RBP18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 A0A1B0GUA9 196 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 RHOBTB3O94955 611 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 FKBP1CQ5VVH2 108 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 PALMO75781 387 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 EDRF1Q3B7T1 1238 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 KIAA1683Q9H0B3 1180 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 AAASQ9NRG9 546 aa18.84■□□□□ 0.61
CDC42EP3-201ENST00000295324 SV2CQ496J9 727 aa18.83■□□□□ 0.61
CDC42EP3-201ENST00000295324 AP1M1Q9BXS5 423 aa18.83■□□□□ 0.61
CDC42EP3-201ENST00000295324 SIK2Q9H0K1 926 aa18.83■□□□□ 0.61
CDC42EP3-201ENST00000295324 SP110Q9HB58 689 aa18.83■□□□□ 0.61
CDC42EP3-201ENST00000295324 PARVAQ9NVD7 372 aa18.83■□□□□ 0.61
CDC42EP3-201ENST00000295324 DDX56Q9NY93 547 aaKnown RBP18.83■□□□□ 0.61
CDC42EP3-201ENST00000295324 C2orf54Q08AI8 447 aa18.83■□□□□ 0.61
CDC42EP3-201ENST00000295324 MIPOL1Q8TD10 442 aa18.83■□□□□ 0.61
CDC42EP3-201ENST00000295324 CPSF2Q9P2I0 782 aaKnown RBP18.83■□□□□ 0.61
CDC42EP3-201ENST00000295324 MYMKA6NI61 221 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 EIF3DO15371 548 aaKnown RBP eCLIP18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 ZNF189O75820 626 aaPredicted RBP18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 ACCSLQ4AC99 568 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 MAP3K21Q5TCX8 1036 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 RNF10Q8N5U6 811 aaKnown RBP18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 FHDC1Q9C0D6 1143 aaPredicted RBP18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 REREQ9P2R6 1566 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 CYP11B2P19099 503 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 PAPOLAP51003 745 aaKnown RBP18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 BCAR1P56945 870 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 SF3A3Q12874 501 aaKnown RBP eCLIP18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 DACT2Q5SW24 774 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 TRPV6Q9H1D0 765 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 BCL2L12Q9HB09 334 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 PCDHB7Q9Y5E2 793 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 PPLO60437 1756 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 NPEPPSP55786 919 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 METTL16Q86W50 562 aaKnown RBP18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 CHMP6Q96FZ7 201 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 NUF2Q9BZD4 464 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 GLIS2Q9BZE0 524 aaPredicted RBP18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 WDR35Q9P2L0 1181 aa18.83■□□□□ 0.6
CDC42EP3-201ENST00000295324 KLC3Q6P597 504 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 RHOT1Q8IXI2 618 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 CFAP36Q96G28 342 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 FMO2Q99518 471 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 DHX35Q9H5Z1 703 aaKnown RBP18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 PRRG1O14668 218 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 MSH4O15457 936 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 ZFXP17010 805 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 STX1BP61266 288 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 HERVK_113P62684 666 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 GNGT1P63211 74 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 GFPT1Q06210 699 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 BFSP2Q13515 415 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 SNX17Q15036 470 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 ADSSL1Q8N142 457 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 HEMGNQ9BXL5 484 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 SPATC1LQ9H0A9 340 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 VCX3BQ9H321 246 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 FAM8A1Q9UBU6 413 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 EXOC1LA0A1B0GW35 172 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 KPNA6O60684 536 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 PGK2P07205 417 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 LCP1P13796 627 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 THPOP40225 353 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 KRT17Q04695 432 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 ITPRIPL1Q6GPH6 555 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 SPOPLQ6IQ16 392 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 DEPDC1BQ8WUY9 529 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 C18orf8Q96DM3 657 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 PDHXO00330 501 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 SUPT20HL2P0C7V6 817 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 OR1G1P47890 313 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 ATP1A2P50993 1020 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 TMEM60Q9H2L4 133 aa18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 INTS9Q9NV88 658 aaKnown RBP18.82■□□□□ 0.6
CDC42EP3-201ENST00000295324 NKRFO15226 690 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 STRNO43815 780 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 KRT3P12035 628 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 ARL4CP56559 192 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 GLYCTKQ8IVS8 523 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 RNF25Q96BH1 459 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 GPR182O15218 404 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 CLTAP09496 248 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 HEATR6Q6AI08 1181 aaKnown RBP18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 JADE1Q6IE81 842 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms