RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ELF1P32519 619 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 HSPA9P38646 679 aaKnown RBP17.06■□□□□ 0.32
SSRP1-202ENST00000293880 HDDC2Q7Z4H3 204 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 EHD2Q9NZN4 543 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 MAGI2Q86UL8 1455 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 DENND3A2RUS2 1198 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 SLC30A5Q8TAD4 765 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 USP33Q8TEY7 942 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 SCG3Q8WXD2 468 aaKnown RBP17.06■□□□□ 0.32
SSRP1-202ENST00000293880 PBXIP1Q96AQ6 731 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 EPAS1Q99814 870 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 FAM217BQ9NTX9 383 aaPredicted RBP17.06■□□□□ 0.32
SSRP1-202ENST00000293880 ARHGAP10A1A4S6 786 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 PRR23D1E9PI22 279 aaPredicted RBP17.06■□□□□ 0.32
SSRP1-202ENST00000293880 GH2P01242 217 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 PRR23D2P0DMB1 279 aaPredicted RBP17.06■□□□□ 0.32
SSRP1-202ENST00000293880 VSNL1P62760 191 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 IRX1P78414 480 aaPredicted RBP17.06■□□□□ 0.32
SSRP1-202ENST00000293880 TBC1D9BQ66K14 1250 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 THEM5Q8N1Q8 247 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 NLGN1Q8N2Q7 840 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 ARHGAP18Q8N392 663 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 DPF2Q92785 391 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 ABHD8Q96I13 439 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 POLR3FQ9H1D9 316 aaPredicted RBP17.06■□□□□ 0.32
SSRP1-202ENST00000293880 IL1RL2Q9HB29 575 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 CIITAP33076 1130 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 TXNRD1Q16881 649 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 BZW1Q7L1Q6 419 aaKnown RBP17.06■□□□□ 0.32
SSRP1-202ENST00000293880 ZNF710Q8N1W2 664 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 SLC44A5Q8NCS7 719 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.327e-7■□□□□ 11
SSRP1-202ENST00000293880 STK25O00506 426 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 SERPIND1P05546 499 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 PPARGP37231 505 aaPredicted RBP17.06■□□□□ 0.32
SSRP1-202ENST00000293880 HIC1Q14526 733 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 GLYCTKQ8IVS8 523 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 OSBPL3Q9H4L5 887 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 HSPBP1Q9NZL4 362 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 IP6K2Q9UHH9 426 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 HPCAL4Q9UM19 191 aa17.06■□□□□ 0.32
SSRP1-202ENST00000293880 CCNA1P78396 465 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 CDV3Q9UKY7 258 aaKnown RBP17.05■□□□□ 0.32
SSRP1-202ENST00000293880 SNAP23O00161 211 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 KCNN4O15554 427 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 AKAP10O43572 662 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 RARS2Q5T160 578 aaKnown RBP17.05■□□□□ 0.32
SSRP1-202ENST00000293880 KRT39Q6A163 491 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 CPA5Q8WXQ8 436 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 SH3KBP1Q96B97 665 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 OLFM3Q96PB7 478 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 CFAP74Q9C0B2 1584 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 TTC26A0AVF1 554 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 hCG_1984214I3L0E3 225 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 MAP4P27816 1152 aaKnown RBP17.05■□□□□ 0.32
SSRP1-202ENST00000293880 SPATA21Q7Z572 469 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 ZNF713Q8N859 430 aaPredicted RBP17.05■□□□□ 0.32
SSRP1-202ENST00000293880 INPP5DQ92835 1189 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 AGAP3Q96P47 875 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 CNGA3Q16281 694 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 TLK2Q86UE8 772 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 KCNF1Q9H3M0 494 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 NPC1L1Q9UHC9 1359 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 XPO1O14980 1071 aaKnown RBP17.05■□□□□ 0.32
SSRP1-202ENST00000293880 KIZQ2M2Z5 673 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 SARM1Q6SZW1 724 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 SRLQ86TD4 932 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 SLC9A2Q9UBY0 812 aa17.05■□□□□ 0.32
SSRP1-202ENST00000293880 AARS2Q5JTZ9 985 aaKnown RBP17.04■□□□□ 0.32
SSRP1-202ENST00000293880 FAM102AQ5T9C2 384 aaPredicted RBP17.04■□□□□ 0.32
SSRP1-202ENST00000293880 SLFN12LQ6IEE8 588 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 C4orf33Q8N1A6 199 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 ELMO2Q96JJ3 720 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 TEX12Q9BXU0 123 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 IRX2Q9BZI1 471 aaPredicted RBP17.04■□□□□ 0.32
SSRP1-202ENST00000293880 CYP26B1Q9NR63 512 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 PTK2BQ14289 1009 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 P3H1Q32P28 736 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 SUSD4Q5VX71 490 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 SWSAP1Q6NVH7 229 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 RIN2Q8WYP3 895 aaPredicted RBP17.04■□□□□ 0.32
SSRP1-202ENST00000293880 ADGRA2Q96PE1 1338 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 GRID2IPA4D2P6 1211 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 CYP26A1O43174 497 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 SERPINB3P29508 390 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 TMCO5AQ8N6Q1 288 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 PGBD4Q96DM1 585 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 RUBCNLQ9H714 662 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 GPR108Q9NPR9 543 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 EFCAB6Q5THR3 1501 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 ADGRL2O95490 1459 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 APOL1O14791 398 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 ENO3P13929 434 aaPredicted RBP17.04■□□□□ 0.32
SSRP1-202ENST00000293880 KLK7P49862 253 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 SURF1Q15526 300 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 EXOC8Q8IYI6 725 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 BTN2A2Q8WVV5 523 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 CNBD2Q96M20 576 aa17.04■□□□□ 0.32
SSRP1-202ENST00000293880 LINC00854A0A1B0GVQ3 168 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms