RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 HIPK4Q8NE63 616 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 IFT122Q9HBG6 1241 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 TMEM260Q9NX78 707 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 G3BP2Q9UN86 482 aaKnown RBP12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 GDAQ9Y2T3 454 aa12.14□□□□□ -0.47
NPC1L1-201ENST00000289547 YDJCA8MPS7 323 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 PHF20L1A8MW92 1017 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 ECEL1O95672 775 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 PPM1FP49593 454 aaPredicted RBP12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 PNKPQ96T60 521 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 MYPNQ86TC9 1320 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 ZNF185O15231 689 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 FGGP02679 453 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 APLP1P51693 650 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 ERVK-9P63128 1117 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 ERVK-24P63145 666 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 CCDC92Q53HC0 331 aaPredicted RBP12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 SYT2Q8N9I0 419 aaPredicted RBP12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 WDR18Q9BV38 432 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 NDST4Q9H3R1 872 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 LDHAP00338 332 aaKnown RBP12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 PPP2R5DQ14738 602 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 LRRC14Q15048 493 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 DNERQ8NFT8 737 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 DPF3Q92784 378 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 DTNBP1Q96EV8 351 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 SEC16BQ96JE7 1060 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 LRRC37BQ96QE4 947 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 ANAPC5Q9UJX4 755 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 L1RE1Q9UN81 338 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 DOT1LQ8TEK3 1739 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 ATP8B3O60423 1300 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 LGALS16A8MUM7 142 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 TBX3O15119 743 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 SUPT20HL2P0C7V6 817 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 RPS6P62753 249 aaKnown RBP12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 NXNQ6DKJ4 435 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 KRT80Q6KB66 452 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 MIS12Q9H081 205 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 RPF1Q9H9Y2 349 aaKnown RBP12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 C1orf112Q9NSG2 853 aa12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.13□□□□□ -0.47
NPC1L1-201ENST00000289547 SPAG7O75391 227 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 ZWINTO95229 277 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 SERPING1P05155 500 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 LRRC41Q15345 812 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 RSAD2Q8WXG1 361 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 CYFIP2Q96F07 1278 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 PPP1R16BQ96T49 567 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 P2RX7Q99572 595 aaKnown RBP12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 DDX47Q9H0S4 455 aaKnown RBP12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 FBXO28Q9NVF7 368 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 FBXL5Q9UKA1 691 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 AK9Q5TCS8 1911 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 PTPREP23469 700 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 STOX1Q6ZVD7 989 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 ANKRD23Q86SG2 305 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 PAIP2BQ9ULR5 123 aaKnown RBP12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 A0A0G2JND7 137 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 EXOC1LA0A1B0GW35 172 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 UNCXA6NJT0 531 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 SKAP2O75563 359 aaPredicted RBP12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 APOEP02649 317 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 SGO2Q562F6 1265 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 XKR3Q5GH77 459 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 KLRG1Q96E93 195 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 ERAP1Q9NZ08 941 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 HESX1Q9UBX0 185 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 COL22A1Q8NFW1 1626 aaPredicted RBP12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 IRF6O14896 467 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 STMN1P16949 149 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 HSPA6P17066 643 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 FKBP3Q00688 224 aaKnown RBP12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 KYAT1Q16773 422 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 TMEM154Q6P9G4 183 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 REXO1L1PQ8IX06 675 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 TTC1Q99614 292 aa12.12□□□□□ -0.47
NPC1L1-201ENST00000289547 FOXN1O15353 648 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 FAM107AO95990 144 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 GRAMD4Q6IC98 578 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 MAP7D3Q8IWC1 876 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 TC2NQ8N9U0 490 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 BHMT2Q9H2M3 363 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 MRPL46Q9H2W6 279 aaKnown RBP12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 NR2E3Q9Y5X4 410 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 INHBAP08476 426 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 RHBDL3P58872 404 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 BFSP2Q13515 415 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 ALKBH5Q6P6C2 394 aaKnown RBP12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 PADI6Q6TGC4 694 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 RDM1Q8NG50 284 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 PPWD1Q96BP3 646 aaKnown RBP12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 STAMBPL1Q96FJ0 436 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 ESYT2A0FGR8 921 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 DLATP10515 647 aaKnown RBP12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 CYP2C8P10632 490 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms