RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 NCKAP1LP55160 1127 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 CAMK1Q14012 370 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 ZNF568Q3ZCX4 644 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 AXDND1Q5T1B0 1012 aaPredicted RBP27.61■■■□□ 2.01
PDF-201ENST00000288022 HAUS6Q7Z4H7 955 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 SLC39A11Q8N1S5 342 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 MRPS27Q92552 414 aaKnown RBP27.61■■■□□ 2.01
PDF-201ENST00000288022 DDX12PQ92771 950 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 CHAMP1Q96JM3 812 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 RPS6KC1Q96S38 1066 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 TCHPQ9BT92 498 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 TLR9Q9NR96 1032 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 SNTG2Q9NY99 539 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 DNAJB4Q9UDY4 337 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 RCOR1Q9UKL0 485 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 CARNS1A5YM72 827 aa27.6■■■□□ 2.01
PDF-201ENST00000288022 MYMKA6NI61 221 aa27.6■■■□□ 2.01
PDF-201ENST00000288022 TRAK2O60296 914 aa27.6■■■□□ 2.01
PDF-201ENST00000288022 DDHD2O94830 711 aa27.6■■■□□ 2.01
PDF-201ENST00000288022 PLCB3Q01970 1234 aa27.6■■■□□ 2.01
PDF-201ENST00000288022 TMEM169Q96HH4 297 aa27.6■■■□□ 2.01
PDF-201ENST00000288022 SPATA32Q96LK8 384 aa27.6■■■□□ 2.01
PDF-201ENST00000288022 FAM13BQ9NYF5 915 aa27.6■■■□□ 2.01
PDF-201ENST00000288022 GDAQ9Y2T3 454 aa27.6■■■□□ 2.01
PDF-201ENST00000288022 ATG2AQ2TAZ0 1938 aa27.59■■■□□ 2.01
PDF-201ENST00000288022 INPPL1O15357 1258 aa27.59■■■□□ 2.01
PDF-201ENST00000288022 IRS1P35568 1242 aa27.59■■■□□ 2.01
PDF-201ENST00000288022 SLC11A1P49279 550 aa27.59■■■□□ 2.01
PDF-201ENST00000288022 ZBTB33Q86T24 672 aa27.59■■■□□ 2.01
PDF-201ENST00000288022 FAM178BQ8IXR5 827 aa27.59■■■□□ 2.01
PDF-201ENST00000288022 DHX58Q96C10 678 aa27.59■■■□□ 2.01
PDF-201ENST00000288022 BICD1Q96G01 975 aa27.59■■■□□ 2.01
PDF-201ENST00000288022 MIOSQ9NXC5 875 aa27.59■■■□□ 2.01
PDF-201ENST00000288022 LZTS1Q9Y250 596 aa27.59■■■□□ 2.01
PDF-201ENST00000288022 EYSQ5T1H1 3165 aa27.58■■■□□ 2.01
PDF-201ENST00000288022 B4GALT3O60512 393 aa27.58■■■□□ 2.01
PDF-201ENST00000288022 RECQL4O94761 1208 aa27.58■■■□□ 2.01
PDF-201ENST00000288022 GALTP07902 379 aa27.58■■■□□ 2.01
PDF-201ENST00000288022 HLA-CQ95604 372 aa27.58■■■□□ 2.01
PDF-201ENST00000288022 PPP2R3CQ969Q6 453 aa27.58■■■□□ 2.01
PDF-201ENST00000288022 CDT1Q9H211 546 aa27.58■■■□□ 2.01
PDF-201ENST00000288022 ALDH2P05091 517 aa27.57■■■□□ 2
PDF-201ENST00000288022 HARSP12081 509 aaKnown RBP27.57■■■□□ 2
PDF-201ENST00000288022 IDEP14735 1019 aa27.57■■■□□ 2
PDF-201ENST00000288022 MPZL3Q6UWV2 235 aa27.57■■■□□ 2
PDF-201ENST00000288022 EP400NLQ6ZTU2 488 aa27.57■■■□□ 2
PDF-201ENST00000288022 IQUBQ8NA54 791 aa27.57■■■□□ 2
PDF-201ENST00000288022 LEO1Q8WVC0 666 aaPredicted RBP27.57■■■□□ 2
PDF-201ENST00000288022 TMEM175Q9BSA9 504 aa27.57■■■□□ 2
PDF-201ENST00000288022 CUEDC2Q9H467 287 aa27.57■■■□□ 2
PDF-201ENST00000288022 ENTPD7Q9NQZ7 604 aa27.57■■■□□ 2
PDF-201ENST00000288022 ANKFY1Q9P2R3 1169 aa27.57■■■□□ 2
PDF-201ENST00000288022 COG5Q9UP83 839 aa27.57■■■□□ 2
PDF-201ENST00000288022 FAN1Q9Y2M0 1017 aa27.57■■■□□ 2
PDF-201ENST00000288022 PCDHGC5Q9Y5F6 944 aa27.57■■■□□ 2
PDF-201ENST00000288022 ZMYM2Q9UBW7 1377 aa27.57■■■□□ 2
PDF-201ENST00000288022 TDRD15B5MCY1 1934 aaKnown RBP27.57■■■□□ 2
PDF-201ENST00000288022 SCP2P22307 547 aa27.56■■■□□ 2
PDF-201ENST00000288022 NMT1P30419 496 aaKnown RBP27.56■■■□□ 2
PDF-201ENST00000288022 MATR3P43243 847 aaKnown RBP eCLIP27.56■■■□□ 2
PDF-201ENST00000288022 OR1G1P47890 313 aa27.56■■■□□ 2
PDF-201ENST00000288022 ERVFC1P60507 584 aa27.56■■■□□ 2
PDF-201ENST00000288022 GRIK3Q13003 919 aa27.56■■■□□ 2
PDF-201ENST00000288022 E2F4Q16254 413 aa27.56■■■□□ 2
PDF-201ENST00000288022 RESP18Q5W5W9 173 aa27.56■■■□□ 2
PDF-201ENST00000288022 TMEM173Q86WV6 379 aaPredicted RBP27.56■■■□□ 2
PDF-201ENST00000288022 SFR1Q86XK3 245 aa27.56■■■□□ 2
PDF-201ENST00000288022 STAMQ92783 540 aa27.56■■■□□ 2
PDF-201ENST00000288022 IGSF21Q96ID5 467 aa27.56■■■□□ 2
PDF-201ENST00000288022 TCF25Q9BQ70 676 aa27.56■■■□□ 2
PDF-201ENST00000288022 IGFLR1Q9H665 355 aa27.56■■■□□ 2
PDF-201ENST00000288022 PTPRHQ9HD43 1115 aa27.56■■■□□ 2
PDF-201ENST00000288022 TBX20Q9UMR3 447 aa27.56■■■□□ 2
PDF-201ENST00000288022 NR1I2O75469 434 aa27.55■■■□□ 2
PDF-201ENST00000288022 TOM1L1O75674 476 aa27.55■■■□□ 2
PDF-201ENST00000288022 MCF2P10911 925 aa27.55■■■□□ 2
PDF-201ENST00000288022 OSTNP61366 133 aa27.55■■■□□ 2
PDF-201ENST00000288022 NUCB2P80303 420 aa27.55■■■□□ 2
PDF-201ENST00000288022 PLPP4Q5VZY2 271 aa27.55■■■□□ 2
PDF-201ENST00000288022 ZPBP2Q6X784 338 aa27.55■■■□□ 2
PDF-201ENST00000288022 COLGALT2Q8IYK4 626 aa27.55■■■□□ 2
PDF-201ENST00000288022 GSTCDQ8NEC7 633 aa27.55■■■□□ 2
PDF-201ENST00000288022 DNAJC19Q96DA6 116 aa27.55■■■□□ 2
PDF-201ENST00000288022 ZBTB45Q96K62 511 aaPredicted RBP27.55■■■□□ 2
PDF-201ENST00000288022 CCDC94Q9BW85 323 aaPredicted RBP27.55■■■□□ 2
PDF-201ENST00000288022 LRRC27Q9C0I9 530 aa27.55■■■□□ 2
PDF-201ENST00000288022 PRG3Q9Y2Y8 225 aaPredicted RBP27.55■■■□□ 2
PDF-201ENST00000288022 NRP1O14786 923 aa27.54■■■□□ 2
PDF-201ENST00000288022 POLR2DO15514 142 aaKnown RBP27.54■■■□□ 2
PDF-201ENST00000288022 GAP43P17677 238 aa27.54■■■□□ 2
PDF-201ENST00000288022 PROZP22891 400 aa27.54■■■□□ 2
PDF-201ENST00000288022 CA8P35219 290 aa27.54■■■□□ 2
PDF-201ENST00000288022 GRM5P41594 1212 aa27.54■■■□□ 2
PDF-201ENST00000288022 LIG4P49917 911 aa27.54■■■□□ 2
PDF-201ENST00000288022 YARSP54577 528 aaKnown RBP27.54■■■□□ 2
PDF-201ENST00000288022 TFF2Q03403 129 aa27.54■■■□□ 2
PDF-201ENST00000288022 PDE12Q6L8Q7 609 aaKnown RBP27.54■■■□□ 2
PDF-201ENST00000288022 TMC7Q7Z402 723 aa27.54■■■□□ 2
PDF-201ENST00000288022 ADGRD2Q7Z7M1 963 aa27.54■■■□□ 2
PDF-201ENST00000288022 RBM23Q86U06 439 aaKnown RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms