RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 KIAA0391O15091 583 aaKnown RBP14.32□□□□□ -0.12
SCAF4-201ENST00000286835 PEX3P56589 373 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 MXRA7P84157 204 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 C4orf33Q8N1A6 199 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 FAM20AQ96MK3 541 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 RAB3IPQ96QF0 476 aaPredicted RBP14.32□□□□□ -0.12
SCAF4-201ENST00000286835 ZSWIM1Q9BR11 485 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 ALG13Q9NP73 1137 aaKnown RBP14.32□□□□□ -0.12
SCAF4-201ENST00000286835 AGPAT3Q9NRZ7 376 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 NFS1Q9Y697 457 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 ASTN1O14525 1302 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 TCRBV7S2A1N4TA0A589 114 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 ATP2A1O14983 1001 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 PPFIA2O75334 1257 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 UPP2O95045 317 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 POLR2MP0CAP2 368 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 HOXA7P31268 230 aaPredicted RBP14.32□□□□□ -0.12
SCAF4-201ENST00000286835 DNAJC3Q13217 504 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 AP3B2Q13367 1082 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 CAPRIN2Q6IMN6 1127 aaKnown RBP14.32□□□□□ -0.12
SCAF4-201ENST00000286835 C3orf20Q8ND61 904 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 MCUR1Q96AQ8 359 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 ERP27Q96DN0 273 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 SAYSD1Q9NPB0 183 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 ARL2BPQ9Y2Y0 163 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 SLC16A3O15427 465 aaKnown RBP14.32□□□□□ -0.12
SCAF4-201ENST00000286835 RIPK2O43353 540 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 TNNI1P19237 187 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 ECHS1P30084 290 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 NT5C2P49902 561 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 STRN3Q13033 797 aa14.32□□□□□ -0.12
SCAF4-201ENST00000286835 CES2O00748 559 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 SLC16A4O15374 487 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 ATP2A2P16615 1042 aaKnown RBP14.31□□□□□ -0.12
SCAF4-201ENST00000286835 MFAP3P55082 362 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 COPS2P61201 443 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 DUPD1Q68J44 220 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 RFX8Q6ZV50 586 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 VPS52Q8N1B4 723 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 CHURC1Q8WUH1 139 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 LAMB4A4D0S4 1761 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 MYO3BQ8WXR4 1341 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 NUP188Q5SRE5 1749 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 PRKCIP41743 596 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 ITGA8P53708 1063 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 RAD23BP54727 409 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 GNPTABQ3T906 1256 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 LMBRD2Q68DH5 695 aaPredicted RBP14.31□□□□□ -0.12
SCAF4-201ENST00000286835 C6orf89Q6UWU4 347 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 CPNE8Q86YQ8 564 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 SLC13A5Q86YT5 568 aaPredicted RBP14.31□□□□□ -0.12
SCAF4-201ENST00000286835 PRELID2Q8N945 189 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 FNBP1Q96RU3 617 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 LXNQ9BS40 222 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 MTFR1LQ9H019 292 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 TARSP26639 723 aaKnown RBP14.31□□□□□ -0.12
SCAF4-201ENST00000286835 RHBDL3P58872 404 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 ZRSR2Q15696 482 aaKnown RBP14.31□□□□□ -0.12
SCAF4-201ENST00000286835 XKR9Q5GH70 373 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 ANKRD35Q8N283 1001 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 GBP7Q8N8V2 638 aaPredicted RBP14.31□□□□□ -0.12
SCAF4-201ENST00000286835 ATP8B4Q8TF62 1192 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 NT5C1BQ96P26 610 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 TEKT3Q9BXF9 490 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 SERPINA10Q9UK55 444 aa14.31□□□□□ -0.12
SCAF4-201ENST00000286835 CLGNO14967 610 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 GSCP56915 257 aaPredicted RBP14.3□□□□□ -0.12
SCAF4-201ENST00000286835 DYNLT1P63172 113 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 FYB2Q5VWT5 728 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 PADI6Q6TGC4 694 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 SCYL3Q8IZE3 742 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 POMGNT1Q8WZA1 660 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 SMC6Q96SB8 1091 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 TMEM59LQ9UK28 342 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 A0A0A6YYK5 440 aaPredicted RBP14.3□□□□□ -0.12
SCAF4-201ENST00000286835 PI4K2BG5E9Z4 385 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 RARAP10276 462 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 MSH2P43246 934 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 NSFP46459 744 aaKnown RBP14.3□□□□□ -0.12
SCAF4-201ENST00000286835 DLG4P78352 724 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 DPY19L2Q6NUT2 758 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 SULF1Q8IWU6 871 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 STMN2Q93045 179 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 LRRC37BQ96QE4 947 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 IQCGQ9H095 443 aaKnown RBP14.3□□□□□ -0.12
SCAF4-201ENST00000286835 ATP6V0A4Q9HBG4 840 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 PKD1L3Q7Z443 1732 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 SMIM24O75264 130 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 GH1P01241 217 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 RARGP13631 454 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 AUHQ13825 339 aaKnown RBP14.3□□□□□ -0.12
SCAF4-201ENST00000286835 TSNAXIP1Q2TAA8 658 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 UBAP2Q5T6F2 1119 aaKnown RBP14.3□□□□□ -0.12
SCAF4-201ENST00000286835 DAB2IPQ5VWQ8 1189 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 DPH6Q7L8W6 267 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 CCHCR1Q8TD31 782 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 CPA5Q8WXQ8 436 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 TMEM237Q96Q45 408 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 CBWD1Q9BRT8 395 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 WNT8AQ9H1J5 351 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms