RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ZBTB42B2RXF5 422 aa22.75■■□□□ 1.23
YBX3-202ENST00000279550 HBP1O60381 514 aa22.75■■□□□ 1.23
YBX3-202ENST00000279550 DUSP11O75319 330 aaKnown RBP22.75■■□□□ 1.23
YBX3-202ENST00000279550 LRRN2O75325 713 aa22.75■■□□□ 1.23
YBX3-202ENST00000279550 CNGA1P29973 690 aa22.75■■□□□ 1.23
YBX3-202ENST00000279550 SRGAP1Q7Z6B7 1085 aa22.75■■□□□ 1.23
YBX3-202ENST00000279550 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.75■■□□□ 1.23
YBX3-202ENST00000279550 AP5M1Q9H0R1 490 aa22.75■■□□□ 1.23
YBX3-202ENST00000279550 EPC1Q9H2F5 836 aa22.75■■□□□ 1.23
YBX3-202ENST00000279550 ADAMTS1Q9UHI8 967 aa22.75■■□□□ 1.23
YBX3-202ENST00000279550 H3BRB1 525 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 SEPT4O43236 478 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 HMGCRP04035 888 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 RFC5P40937 340 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 GCLMP48507 274 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 CPT1AP50416 773 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 TEX35Q5T0J7 233 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 PAPD7Q5XG87 772 aaKnown RBP22.74■■□□□ 1.23
YBX3-202ENST00000279550 FBXO38Q6PIJ6 1188 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 OLIG1Q8TAK6 271 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 IFT74Q96LB3 600 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 PACSIN1Q9BY11 444 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 GPR88Q9GZN0 384 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 TUT1Q9H6E5 874 aaKnown RBP22.74■■□□□ 1.23
YBX3-202ENST00000279550 GFPT2O94808 682 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 PRKAR2AP13861 404 aaKnown RBP22.74■■□□□ 1.23
YBX3-202ENST00000279550 MCCD1P59942 119 aaPredicted RBP22.74■■□□□ 1.23
YBX3-202ENST00000279550 WHAMMP3Q1A5X7 153 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 EPC2Q52LR7 807 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 PXYLP1Q8TE99 480 aa22.74■■□□□ 1.23
YBX3-202ENST00000279550 F8VZ95 297 aa22.73■■□□□ 1.23
YBX3-202ENST00000279550 GLRA2P23416 452 aa22.73■■□□□ 1.23
YBX3-202ENST00000279550 ARL2P36404 184 aa22.73■■□□□ 1.23
YBX3-202ENST00000279550 IRX5P78411 483 aaPredicted RBP22.73■■□□□ 1.23
YBX3-202ENST00000279550 DRAP1Q14919 205 aaPredicted RBP22.73■■□□□ 1.23
YBX3-202ENST00000279550 SNRNP35Q16560 246 aaKnown RBP22.73■■□□□ 1.23
YBX3-202ENST00000279550 BRDTQ58F21 947 aaPredicted RBP22.73■■□□□ 1.23
YBX3-202ENST00000279550 PHLDB3Q6NSJ2 640 aa22.73■■□□□ 1.23
YBX3-202ENST00000279550 MTERF4Q7Z6M4 381 aaKnown RBP22.73■■□□□ 1.23
YBX3-202ENST00000279550 MAP7D2Q96T17 732 aa22.73■■□□□ 1.23
YBX3-202ENST00000279550 STK33Q9BYT3 514 aa22.73■■□□□ 1.23
YBX3-202ENST00000279550 APEX2Q9UBZ4 518 aa22.73■■□□□ 1.23
YBX3-202ENST00000279550 NENFQ9UMX5 172 aa22.73■■□□□ 1.23
YBX3-202ENST00000279550 USP20Q9Y2K6 914 aa22.73■■□□□ 1.23
YBX3-202ENST00000279550 TACC1O75410 805 aa22.72■■□□□ 1.23
YBX3-202ENST00000279550 MAFO75444 373 aaPredicted RBP22.72■■□□□ 1.23
YBX3-202ENST00000279550 SOX5P35711 763 aa22.72■■□□□ 1.23
YBX3-202ENST00000279550 STAT1P42224 750 aa22.72■■□□□ 1.23
YBX3-202ENST00000279550 CHMP4BP1P59074 171 aa22.72■■□□□ 1.23
YBX3-202ENST00000279550 ARHGEF19Q8IW93 802 aa22.72■■□□□ 1.23
YBX3-202ENST00000279550 CEP112Q8N8E3 955 aa22.72■■□□□ 1.23
YBX3-202ENST00000279550 BZW2Q9Y6E2 419 aaKnown RBP22.72■■□□□ 1.23
YBX3-202ENST00000279550 SIP14410 1827 aa22.72■■□□□ 1.23
YBX3-202ENST00000279550 SRGAP2O75044 1071 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 H2AFXP16104 143 aaPredicted RBP22.71■■□□□ 1.23
YBX3-202ENST00000279550 FERP16591 822 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 PRMT2P55345 433 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 FSCN1Q16658 493 aaKnown RBP22.71■■□□□ 1.23
YBX3-202ENST00000279550 MAP3K21Q5TCX8 1036 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 EXOC8Q8IYI6 725 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 GOLGA1Q92805 767 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 FBXL18Q96ME1 805 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 TMEM117Q9H0C3 514 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 WBP1LQ9NX94 342 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 ANO9A1A5B4 782 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 N4BP1O75113 896 aaKnown RBP22.71■■□□□ 1.23
YBX3-202ENST00000279550 F2P00734 622 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 CCND3P30281 292 aaPredicted RBP22.71■■□□□ 1.23
YBX3-202ENST00000279550 DNAAF5Q86Y56 855 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 TRIM58Q8NG06 486 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 TRAPPC12Q8WVT3 735 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 POMGNT1Q8WZA1 660 aa22.71■■□□□ 1.23
YBX3-202ENST00000279550 TOPORSQ9NS56 1045 aaPredicted RBP22.71■■□□□ 1.23
YBX3-202ENST00000279550 LRRIQ3A6PVS8 624 aaPredicted RBP22.7■■□□□ 1.22
YBX3-202ENST00000279550 HNRNPDLO14979 420 aaKnown RBP22.7■■□□□ 1.22
YBX3-202ENST00000279550 P4HA2O15460 535 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 BUB1O43683 1085 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 RRP9O43818 475 aaKnown RBP22.7■■□□□ 1.22
YBX3-202ENST00000279550 GAS2O43903 313 aaKnown RBP22.7■■□□□ 1.22
YBX3-202ENST00000279550 EVI5O60447 810 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 RARBP10826 455 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 INSRRP14616 1297 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 ZSCAN20P17040 1043 aaPredicted RBP22.7■■□□□ 1.22
YBX3-202ENST00000279550 GJA9P57773 515 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 BEX3Q00994 111 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 ZNF484Q5JVG2 852 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 BICD1Q96G01 975 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 MFSD14AQ96MC6 490 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 POP1Q99575 1024 aaKnown RBP22.7■■□□□ 1.22
YBX3-202ENST00000279550 TRIM17Q9Y577 477 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 SAR1BQ9Y6B6 198 aa22.7■■□□□ 1.22
YBX3-202ENST00000279550 IGKV6-21A0A0C4DH24 114 aa22.69■■□□□ 1.22
YBX3-202ENST00000279550 DDX3XO00571 662 aaKnown RBP eCLIP22.69■■□□□ 1.222e-12■■□□□ 13.9
YBX3-202ENST00000279550 C6orf222P0C671 652 aaPredicted RBP22.69■■□□□ 1.22
YBX3-202ENST00000279550 KLRC1P26715 233 aa22.69■■□□□ 1.22
YBX3-202ENST00000279550 MXI1P50539 228 aa22.69■■□□□ 1.22
YBX3-202ENST00000279550 DRP2Q13474 957 aa22.69■■□□□ 1.22
YBX3-202ENST00000279550 NAB2Q15742 525 aa22.69■■□□□ 1.22
YBX3-202ENST00000279550 ARHGAP44Q17R89 818 aa22.69■■□□□ 1.22
YBX3-202ENST00000279550 SLAIN1Q8ND83 568 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms