RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 AGMOQ6ZNB7 445 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 EP400NLQ6ZTU2 488 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 TAS1R3Q7RTX0 852 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 ZNF598Q86UK7 904 aaKnown RBP7.16□□□□□ -1.26
CD44-204ENST00000279452 COLGALT1Q8NBJ5 622 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 SMG8Q8ND04 991 aaKnown RBP7.16□□□□□ -1.26
CD44-204ENST00000279452 SLC17A8Q8NDX2 589 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 MAFAQ8NHW3 353 aaPredicted RBP7.16□□□□□ -1.26
CD44-204ENST00000279452 MICAL1Q8TDZ2 1067 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 HPS3Q969F9 1004 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 CCDC47Q96A33 483 aaKnown RBP7.16□□□□□ -1.26
CD44-204ENST00000279452 FAM212AQ96EL1 285 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 ZNF558Q96NG5 402 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 IPO9Q96P70 1041 aaKnown RBP7.16□□□□□ -1.26
CD44-204ENST00000279452 ACO2Q99798 780 aaKnown RBP7.16□□□□□ -1.26
CD44-204ENST00000279452 TRAIPQ9BWF2 469 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 TRIM9Q9C026 710 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 CDT1Q9H211 546 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 GOLPH3LQ9H4A5 285 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 RC3H2Q9HBD1 1191 aaKnown RBP7.16□□□□□ -1.26
CD44-204ENST00000279452 ALG13Q9NP73 1137 aaKnown RBP7.16□□□□□ -1.26
CD44-204ENST00000279452 TSHZ2Q9NRE2 1034 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 RNF19AQ9NV58 838 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 EXOC1Q9NV70 894 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 TBC1D13Q9NVG8 400 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 SEL1LQ9UBV2 794 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 TBX20Q9UMR3 447 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 EXOC7Q9UPT5 735 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 TNFSF13BQ9Y275 285 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 PTPRSQ13332 1948 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 LOXHD1Q8IVV2 1947 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 EVPLQ92817 2033 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 TET1Q8NFU7 2136 aa7.16□□□□□ -1.26
CD44-204ENST00000279452 GBF1Q92538 1859 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 A0A1W2PQ27 194 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 A0A1W2PQ64 194 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 A0A1W2PQD8 194 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 ARL5CA6NH57 179 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 NT5C1B-RDH14C9J2C7 533 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 ACTN4O43707 911 aaKnown RBP7.15□□□□□ -1.26
CD44-204ENST00000279452 LPXNO60711 386 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 OFD1O75665 1012 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 TOM1L1O75674 476 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 FGF18O76093 207 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 SLFN14P0C7P3 912 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 MYBP10242 640 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 MCF2P10911 925 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 OR1G1P47890 313 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 BCAR1P56945 870 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 KRT17Q04695 432 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 CUL4BQ13620 913 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 SEZ6Q53EL9 994 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 GLRA4Q5JXX5 417 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 FAM26FQ5R3K3 315 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 KCNT2Q6UVM3 1135 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 ZPBP2Q6X784 338 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 MRPL10Q7Z7H8 261 aaKnown RBP7.15□□□□□ -1.26
CD44-204ENST00000279452 CRIPAKQ8N1N5 446 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 CEP120Q8N960 986 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 KLHL23Q8NBE8 558 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 DNAJC19Q96DA6 116 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 PAGE5Q96GU1 130 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 TMEM169Q96HH4 297 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 ZBTB45Q96K62 511 aaPredicted RBP7.15□□□□□ -1.26
CD44-204ENST00000279452 ACCSQ96QU6 501 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 NTPCRQ9BSD7 190 aaKnown RBP7.15□□□□□ -1.26
CD44-204ENST00000279452 MSTO1Q9BUK6 570 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 PLVAPQ9BX97 442 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 ENTPD7Q9NQZ7 604 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 TOPORSQ9NS56 1045 aaPredicted RBP7.15□□□□□ -1.26
CD44-204ENST00000279452 KBTBD4Q9NVX7 518 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 KANSL3Q9P2N6 904 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 DNAJB4Q9UDY4 337 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 USP25Q9UHP3 1055 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 STXBP5LQ9Y2K9 1186 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 GIT1Q9Y2X7 761 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 PRG3Q9Y2Y8 225 aaPredicted RBP7.15□□□□□ -1.26
CD44-204ENST00000279452 PCDHB13Q9Y5F0 798 aa7.15□□□□□ -1.26
CD44-204ENST00000279452 DNAH12Q6ZR08 3092 aa7.15□□□□□ -1.27
CD44-204ENST00000279452 COL4A4P53420 1690 aaPredicted RBP7.15□□□□□ -1.27
CD44-204ENST00000279452 COL4A6Q14031 1691 aa7.15□□□□□ -1.27
CD44-204ENST00000279452 CASTOR2A6NHX0 329 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 TISP43B9A030 160 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 H3BNC9 293 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 GRM6O15303 877 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 KINO60870 393 aaKnown RBP7.14□□□□□ -1.27
CD44-204ENST00000279452 PRPF6O94906 941 aaKnown RBP7.14□□□□□ -1.27
CD44-204ENST00000279452 ZNF202O95125 648 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 RB1P06400 928 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 PRR29P0C7W0 189 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 SCP2P22307 547 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 PPM1AP35813 382 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 GRM5P41594 1212 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 AFF1P51825 1210 aaKnown RBP7.14□□□□□ -1.27
CD44-204ENST00000279452 CASP5P51878 434 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 GTF2BQ00403 316 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 PPP2R3AQ06190 1150 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 GRIK3Q13003 919 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 ALCAMQ13740 583 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms