RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ANGPTL2Q9UKU9 493 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 PCDHA10Q9Y5I2 948 aa12.6□□□□□ -0.39
SHPRH-201ENST00000275233 ZCCHC11Q5TAX3 1644 aaKnown RBP12.6□□□□□ -0.39
SHPRH-201ENST00000275233 CTIFO43310 598 aaKnown RBP12.59□□□□□ -0.39
SHPRH-201ENST00000275233 EIF3BP55884 814 aaKnown RBP12.59□□□□□ -0.39
SHPRH-201ENST00000275233 BAATQ14032 418 aaPredicted RBP12.59□□□□□ -0.39
SHPRH-201ENST00000275233 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 FGFR1OP2Q9NVK5 253 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 AGAP1Q9UPQ3 857 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 MAGOHP61326 146 aaKnown RBP12.59□□□□□ -0.39
SHPRH-201ENST00000275233 COBLL1Q53SF7 1204 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 TTC23LQ6PF05 361 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 HAUS6Q7Z4H7 955 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 SLC26A7Q8TE54 656 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 MAGEB5Q9BZ81 275 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 FAM95CA0A1B0GW59 222 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 ASB14A6NK59 587 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 GYG2O15488 501 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 SETSIPP0DME0 302 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 ANGEL2Q5VTE6 544 aaKnown RBP12.59□□□□□ -0.39
SHPRH-201ENST00000275233 SEPT5Q99719 369 aaPredicted RBP12.59□□□□□ -0.39
SHPRH-201ENST00000275233 E2F8A0AVK6 867 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 TBC1D16Q8TBP0 767 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 PGBD4Q96DM1 585 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 DIS3Q9Y2L1 958 aaKnown RBP12.59□□□□□ -0.39
SHPRH-201ENST00000275233 KPNA7A9QM74 516 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 APOL1O14791 398 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 KRT38O76015 456 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 MDH1BQ5I0G3 518 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 TEKT4Q8WW24 435 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 ARL8AQ96BM9 186 aa12.59□□□□□ -0.39
SHPRH-201ENST00000275233 KBTBD13C9JR72 458 aa12.58□□□□□ -0.39
SHPRH-201ENST00000275233 KCNJ6P48051 423 aa12.58□□□□□ -0.39
SHPRH-201ENST00000275233 NUMBP49757 651 aa12.58□□□□□ -0.39
SHPRH-201ENST00000275233 EPC1Q9H2F5 836 aa12.58□□□□□ -0.39
SHPRH-201ENST00000275233 CYP4F11Q9HBI6 524 aa12.58□□□□□ -0.39
SHPRH-201ENST00000275233 SNX9Q9Y5X1 595 aa12.58□□□□□ -0.39
SHPRH-201ENST00000275233 ZSCAN9O15535 394 aaPredicted RBP12.58□□□□□ -0.4
SHPRH-201ENST00000275233 GRAP2O75791 330 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 POLE2P56282 527 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 WDR72Q3MJ13 1102 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 OSBPL9Q96SU4 736 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 ZFP69BQ9UJL9 534 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 HMGB1P1B2RPK0 211 aaPredicted RBP12.58□□□□□ -0.4
SHPRH-201ENST00000275233 KCNN4O15554 427 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 TMCC1O94876 653 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 GGPS1O95749 300 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 PLA2G4FQ68DD2 849 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 TUBB6Q9BUF5 446 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 PLEKHA5Q9HAU0 1116 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 TEKT2Q9UIF3 430 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 OVOS2A0A0G2JMS6 1433 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 OVOS2A0A0J9YW53 1432 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 OVOS2Q6IE36 1432 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 EIF4E1BA6NMX2 242 aaKnown RBP12.58□□□□□ -0.4
SHPRH-201ENST00000275233 GOLGA8RI6L899 631 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 GGCXP38435 758 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 THEGQ9P2T0 379 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 IQCA1LA6NCM1 817 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 PFDN1O60925 122 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 CHGBP05060 677 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 TPI1P60174 286 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 NCAPHQ15003 741 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
SHPRH-201ENST00000275233 HPS4Q9NQG7 708 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 PARVAQ9NVD7 372 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 CDHR2Q9BYE9 1310 aa12.58□□□□□ -0.4
SHPRH-201ENST00000275233 OCM2P0CE71 109 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 OCMP0CE72 109 aaPredicted RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 ARSEP51690 589 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 SESN2P58004 480 aaPredicted RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 HSP90AA5PQ58FG0 334 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 AIPL1Q9NZN9 384 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 DNAJC8O75937 253 aaPredicted RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 GUCY2CP25092 1073 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 IFNA8P32881 189 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 ERFP50548 548 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 TMED1Q13445 227 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 EFTUD2Q15029 972 aaKnown RBP eCLIP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 PCSK7Q16549 785 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 FBXO38Q6PIJ6 1188 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 CCDC137Q6PK04 289 aaKnown RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 KCNV2Q8TDN2 545 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 CCDC90BQ9GZT6 254 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 CCDC188H7C350 402 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 KRT7P08729 469 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 ADRA2BP18089 450 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 FGFR4P22455 802 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 ATP6V1E1P36543 226 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 APPL2Q8NEU8 664 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 NEUROG2Q9H2A3 272 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 C2CD2LO14523 706 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 EIF3EP60228 445 aaKnown RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 CDK17Q00537 523 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 MDM2Q00987 491 aaPredicted RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 MORF4L2Q15014 288 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 FMR1NBQ8N0W7 255 aaPredicted RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 TRIML2Q8N7C3 387 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 WDR48Q8TAF3 677 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 CLMNQ96JQ2 1002 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms