RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 DCAF4L1Q3SXM0 396 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 TWF2Q6IBS0 349 aaKnown RBP18.79■□□□□ 0.6
SKP2-201ENST00000274254 RTN4RL1Q86UN2 441 aaPredicted RBP18.79■□□□□ 0.6
SKP2-201ENST00000274254 LINC01599Q8WXQ3 324 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 ADAM2Q99965 735 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 EIF2AQ9BY44 585 aaKnown RBP18.79■□□□□ 0.6
SKP2-201ENST00000274254 TSPYL2Q9H2G4 693 aaPredicted RBP18.79■□□□□ 0.6
SKP2-201ENST00000274254 HSPBP1Q9NZL4 362 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 ZMYND8Q9ULU4 1186 aaPredicted RBP18.79■□□□□ 0.6
SKP2-201ENST00000274254 RPL13P26373 211 aaKnown RBP18.79■□□□□ 0.6
SKP2-201ENST00000274254 SPATA1Q5VX52 437 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 CNKSR3Q6P9H4 555 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 APBB1IPQ7Z5R6 666 aaPredicted RBP18.79■□□□□ 0.6
SKP2-201ENST00000274254 ZBTB33Q86T24 672 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 RPUSD2Q8IZ73 545 aaKnown RBP18.79■□□□□ 0.6
SKP2-201ENST00000274254 CSGALNACT2Q8N6G5 542 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 FBXL18Q96ME1 805 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 MSTO1Q9BUK6 570 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 PCIF1Q9H4Z3 704 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 IL23AQ9NPF7 189 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 RGS18Q9NS28 235 aa18.79■□□□□ 0.6
SKP2-201ENST00000274254 AGO2Q9UKV8 859 aaKnown RBP18.79■□□□□ 0.6
SKP2-201ENST00000274254 A0A0U1RQF3 1178 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 IKBKBO14920 756 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 OGTO15294 1046 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 NPTXRO95502 500 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 MATR3P43243 847 aaKnown RBP eCLIP18.78■□□□□ 0.66e-7■■■■□ 23.7
SKP2-201ENST00000274254 CYP2J2P51589 502 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 MYL5Q02045 173 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 FPGSQ05932 587 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 PPIGQ13427 754 aaKnown RBP eCLIP18.78■□□□□ 0.6
SKP2-201ENST00000274254 ADAM9Q13443 819 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 NCAPHQ15003 741 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 IQCB1Q15051 598 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 DHX40Q8IX18 779 aaKnown RBP18.78■□□□□ 0.6
SKP2-201ENST00000274254 ZSWIM2Q8NEG5 633 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 FAM200AQ8TCP9 573 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 CEP63Q96MT8 703 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 CBX8Q9HC52 389 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 FAM105AQ9NUU6 356 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 NR2E3Q9Y5X4 410 aa18.78■□□□□ 0.6
SKP2-201ENST00000274254 MICAL3Q7RTP6 2002 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 C9IYK1 514 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 RGS19P49795 217 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 CRELD2Q6UXH1 353 aaPredicted RBP18.77■□□□□ 0.6
SKP2-201ENST00000274254 GPD1LQ8N335 351 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 AOPEPQ8N6M6 819 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 CEP120Q8N960 986 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 XXYLT1Q8NBI6 393 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 SAAL1Q96ER3 474 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 EEF2KMTQ96G04 330 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 C1orf112Q9NSG2 853 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 NFE2L3Q9Y4A8 694 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 PCDHB2Q9Y5E7 798 aa18.77■□□□□ 0.6
SKP2-201ENST00000274254 ENPP3O14638 875 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 CETN3O15182 167 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 EXTL3O43909 919 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 ZNF623O75123 536 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 LDHAP00338 332 aaKnown RBP18.76■□□□□ 0.59
SKP2-201ENST00000274254 HARSP12081 509 aaKnown RBP18.76■□□□□ 0.59
SKP2-201ENST00000274254 GRM5P41594 1212 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 CASP4P49662 377 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 RAB27AP51159 221 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 KYAT1Q16773 422 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 ZBTB41Q5SVQ8 909 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 SLC24A5Q71RS6 500 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 C16orf59Q7L2K0 433 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 SMG8Q8ND04 991 aaKnown RBP18.76■□□□□ 0.59
SKP2-201ENST00000274254 SRRTQ9BXP5 876 aaKnown RBP18.76■□□□□ 0.59
SKP2-201ENST00000274254 TRIM6Q9C030 488 aaPredicted RBP18.76■□□□□ 0.59
SKP2-201ENST00000274254 KIAA1586Q9HCI6 787 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 IPPQ9Y573 584 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 TTC3P53804 2025 aa18.76■□□□□ 0.59
SKP2-201ENST00000274254 GOLGA8IPA6NC78 632 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 GOLGA8JA6NMD2 632 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 EXOC3O60645 756 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 AKAP3O75969 853 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 ACRP10323 421 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 ACOT2P49753 483 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 FAM189BP81408 668 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 IKBKEQ14164 716 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 MRPL10Q7Z7H8 261 aaKnown RBP18.75■□□□□ 0.59
SKP2-201ENST00000274254 GAS2L3Q86XJ1 694 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 THNSL1Q8IYQ7 743 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 FAM213AQ9BRX8 229 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 MKNK1Q9BUB5 465 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 HSD3B7Q9H2F3 369 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 NXF3Q9H4D5 531 aaKnown RBP18.75■□□□□ 0.59
SKP2-201ENST00000274254 CPSF3Q9UKF6 684 aaKnown RBP18.75■□□□□ 0.59
SKP2-201ENST00000274254 HES2Q9Y543 173 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 CEP290O15078 2479 aa18.75■□□□□ 0.59
SKP2-201ENST00000274254 ABHD14A-ACY1A0A1B0GW23 586 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 SMTNL1A8MU46 457 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 MAPK13O15264 365 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 FGFR1OPO95684 399 aaKnown RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 STAG3L1P0CL83 205 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 SKIP12755 728 aa18.74■□□□□ 0.59
SKP2-201ENST00000274254 ATF7P17544 494 aaPredicted RBP18.74■□□□□ 0.59
SKP2-201ENST00000274254 TNFSF9P41273 254 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms