RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 KLRC3Q07444 240 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 FXNQ16595 210 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 TMTC3Q6ZXV5 915 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 RRAGAQ7L523 313 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 CCDC82Q8N4S0 544 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 TRIM47Q96LD4 638 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 MAGEB18Q96M61 343 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 SLITRK6Q9H5Y7 841 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 FAM207AQ9NSI2 230 aaPredicted RBP9.83□□□□□ -0.84
PDGFC-201ENST00000274071 MKS1Q9NXB0 559 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.83□□□□□ -0.84
PDGFC-201ENST00000274071 PPP1R9AQ9ULJ8 1098 aa9.83□□□□□ -0.84
PDGFC-201ENST00000274071 NOC2LQ9Y3T9 749 aaKnown RBP9.83□□□□□ -0.84
PDGFC-201ENST00000274071 MRC1P22897 1456 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 TRIM64CA6NLI5 447 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 NBPF26B4DH59 902 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 PLSCR1O15162 318 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 TRMUO75648 421 aaKnown RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 DCTN3O75935 186 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 IGKV5-2P06315 115 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 IL2RBP14784 551 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 POU5F1Q01860 360 aaKnown RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 THOC5Q13769 683 aaKnown RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 ZNF423Q2M1K9 1284 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 BARGINQ6ZT62 677 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 CROCCP2Q86T23 111 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 C11orf74Q86VG3 221 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 TTLL11Q8NHH1 800 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 ITPKCQ96DU7 683 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 GPR101Q96P66 508 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 MAK16Q9BXY0 300 aaKnown RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 RBM38Q9H0Z9 239 aaKnown RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 GOLPH3Q9H4A6 298 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 TTLL13PA6NNM8 815 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 EXOC3O60645 756 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 FBXO21O94952 628 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 RPN1P04843 607 aaKnown RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 KCNA2P16389 499 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 FOXN2P32314 431 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 STX2P32856 288 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 RPL5P46777 297 aaKnown RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 PLTPP55058 493 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 MED21Q13503 144 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 HNRNPDQ14103 355 aaKnown RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 E2F2Q14209 437 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 PTPROQ16827 1216 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 MFSD5Q6N075 450 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 ANKRD13DQ6ZTN6 518 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 ANO5Q75V66 913 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 VASH1Q7L8A9 365 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 ZNF804AQ7Z570 1209 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 SFR1Q86XK3 245 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 ALDH16A1Q8IZ83 802 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 METTL25Q8N6Q8 603 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 COX4I2Q96KJ9 171 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 BTBD10Q9BSF8 475 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 NOC4LQ9BVI4 516 aaKnown RBP9.82□□□□□ -0.84
PDGFC-201ENST00000274071 CEP44Q9C0F1 390 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 CABP5Q9NP86 173 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 STXBP5LQ9Y2K9 1186 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 COQ6Q9Y2Z9 468 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 NR2E3Q9Y5X4 410 aa9.82□□□□□ -0.84
PDGFC-201ENST00000274071 RBAK-RBAKDNI3L0D1 243 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 GTPBP6O43824 516 aaPredicted RBP9.81□□□□□ -0.84
PDGFC-201ENST00000274071 TFPTP0C1Z6 253 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 KCNA4P22459 653 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 GUCY1A2P33402 732 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 POLR2FP61218 127 aaKnown RBP9.81□□□□□ -0.84
PDGFC-201ENST00000274071 MOGSQ13724 837 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 ARL13BQ3SXY8 428 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 RFX8Q6ZV50 586 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 METTL13Q8N6R0 699 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 FBXO25Q8TCJ0 367 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 HPS3Q969F9 1004 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 SUCLG2Q96I99 432 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 SPATA17Q96L03 361 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 SLC39A3Q9BRY0 314 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 CCDC68Q9H2F9 335 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 HEMK1Q9Y5R4 338 aaPredicted RBP9.81□□□□□ -0.84
PDGFC-201ENST00000274071 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.81□□□□□ -0.84
PDGFC-201ENST00000274071 GOLGA8TH3BQL2 631 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 CCDC22O60826 627 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 ADAMTS2O95450 1211 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 GOLGA8HP0CJ92 632 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 ZBTB48P10074 688 aaPredicted RBP9.81□□□□□ -0.84
PDGFC-201ENST00000274071 ANPEPP15144 967 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 AMPD1P23109 780 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 NADK2Q4G0N4 442 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 HGSNATQ68CP4 663 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 TTI2Q6NXR4 508 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 PDXDC2PQ6P474 469 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 LRP10Q7Z4F1 713 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 MICU3Q86XE3 530 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 ZSCAN29Q8IWY8 852 aaPredicted RBP9.81□□□□□ -0.84
PDGFC-201ENST00000274071 SIX5Q8N196 739 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 NUP85Q9BW27 656 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 SLC26A6Q9BXS9 759 aa9.81□□□□□ -0.84
PDGFC-201ENST00000274071 FHDC1Q9C0D6 1143 aaPredicted RBP9.81□□□□□ -0.84
PDGFC-201ENST00000274071 FOXP1Q9H334 677 aaPredicted RBP9.81□□□□□ -0.84
PDGFC-201ENST00000274071 ARMC7Q9H6L4 198 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms