RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 MOV10L1Q9BXT6 1211 aaKnown RBP8.43□□□□□ -1.06
LIMD1-201ENST00000273317 VPS11Q9H270 941 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 BHMT2Q9H2M3 363 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 SLC9A2Q9UBY0 812 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 ITIH6Q6UXX5 1313 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 HABP4Q5JVS0 413 aaKnown RBP8.43□□□□□ -1.06
LIMD1-201ENST00000273317 CEP95Q96GE4 821 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 FTOQ9C0B1 505 aaKnown RBP eCLIP8.43□□□□□ -1.06
LIMD1-201ENST00000273317 MTO1Q9Y2Z2 717 aaKnown RBP8.43□□□□□ -1.06
LIMD1-201ENST00000273317 HUS1O60921 280 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 FAM47EQ6ZV65 393 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 SFR1Q86XK3 245 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 CFAP69A5D8W1 941 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 CD2BP2O95400 341 aaKnown RBP8.43□□□□□ -1.06
LIMD1-201ENST00000273317 VAMP7P51809 220 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 LBRQ14739 615 aaKnown RBP8.43□□□□□ -1.06
LIMD1-201ENST00000273317 SZRD1Q7Z422 152 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 SLAIN2Q9P270 581 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 M0QYV0 167 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 CLEC17AQ6ZS10 378 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 CATSPER4Q7RTX7 472 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 KIAA2013Q8IYS2 634 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 GUF1Q8N442 669 aaKnown RBP8.43□□□□□ -1.06
LIMD1-201ENST00000273317 SLC26A7Q8TE54 656 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 PCDHB8Q9UN66 801 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 TCP11X1B4DZS4 312 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 PHF2O75151 1096 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 UBE3AQ05086 875 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 MTMR1Q13613 665 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 MAPK6Q16659 721 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 CCDC137Q6PK04 289 aaKnown RBP8.43□□□□□ -1.06
LIMD1-201ENST00000273317 DSTYKQ6XUX3 929 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 FOXP4Q8IVH2 680 aaPredicted RBP8.43□□□□□ -1.06
LIMD1-201ENST00000273317 PPM1NQ8N819 430 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 DCTN4Q9UJW0 460 aa8.43□□□□□ -1.06
LIMD1-201ENST00000273317 PRR23D1E9PI22 279 aaPredicted RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 CLDN3O15551 220 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 RTN2O75298 545 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 KLHL2O95198 593 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 PRR23D2P0DMB1 279 aaPredicted RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 RASGRF1Q13972 1273 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 FASTKD1Q53R41 847 aaKnown RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 IZUMO3Q5VZ72 239 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 ASAP3Q8TDY4 903 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 KCNK16Q96T55 309 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 DIABLOQ9NR28 239 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 GID8Q9NWU2 228 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 FBXL5Q9UKA1 691 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 USP17L3A6NCW0 530 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 USP17L4A6NCW7 530 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 BCAR1P56945 870 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 USP17L1Q7RTZ2 530 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 FMR1NBQ8N0W7 255 aaPredicted RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 DTX3LQ8TDB6 740 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 COA1Q9GZY4 146 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 PDP2Q9P2J9 529 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 MED14O60244 1454 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 MRPS15P82914 257 aaKnown RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 NECTIN1Q15223 517 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 ZNF560Q96MR9 790 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 YIPF3Q9GZM5 350 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 USP15Q9Y4E8 981 aaPredicted RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 BRAFP15056 766 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 BAG6P46379 1132 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 RIBC1Q8N443 379 aaPredicted RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 ATL2Q8NHH9 583 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 MRPL4Q9BYD3 311 aaKnown RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 POLR3FQ9H1D9 316 aaPredicted RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 CCDC134Q9H6E4 229 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 C5orf58C9J3I9 102 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 TNPO2O14787 897 aaKnown RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 EIF3HO15372 352 aaKnown RBP eCLIP8.42□□□□□ -1.064e-7■■■■□ 19.5
LIMD1-201ENST00000273317 WDR47O94967 919 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 GSNP06396 782 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 GNA15P30679 374 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 OR6B3Q8NGW1 331 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 COA7Q96BR5 231 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 SGSM3Q96HU1 749 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 ZFATQ9P243 1243 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 ADGRG1Q9Y653 693 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 FAM47DPA6NHR8 397 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 UNC5CLQ8IV45 518 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 DDIASQ8IXT1 998 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 TEKT4Q8WW24 435 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 IL1RAPL1Q9NZN1 696 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 UVRAGQ9P2Y5 699 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 LRRC7Q96NW7 1537 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 MBD5Q9P267 1494 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 SUPT3HO75486 399 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 KITP10721 976 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 PRCPP42785 496 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 EFNA5P52803 228 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 DRAP1Q14919 205 aaPredicted RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 MAGED2Q9UNF1 606 aaPredicted RBP8.42□□□□□ -1.06
LIMD1-201ENST00000273317 CDYLQ9Y232 598 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 ABCA9Q8IUA7 1624 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 SLC16A2P36021 539 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 SLC10A5Q5PT55 438 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 ORAI2Q96SN7 254 aa8.42□□□□□ -1.06
LIMD1-201ENST00000273317 PUS7LQ9H0K6 701 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms