RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.46□□□□□ -0.89
TRIM43-201ENST00000272395 CRISPLD2Q9H0B8 497 aa9.46□□□□□ -0.89
TRIM43-201ENST00000272395 ZHX3Q9H4I2 956 aa9.46□□□□□ -0.89
TRIM43-201ENST00000272395 AGO4Q9HCK5 861 aaKnown RBP9.46□□□□□ -0.89
TRIM43-201ENST00000272395 KCND2Q9NZV8 630 aa9.46□□□□□ -0.89
TRIM43-201ENST00000272395 SEL1LQ9UBV2 794 aa9.46□□□□□ -0.89
TRIM43-201ENST00000272395 ADAMTS1Q9UHI8 967 aa9.46□□□□□ -0.89
TRIM43-201ENST00000272395 MCM3APO60318 1980 aa9.46□□□□□ -0.9
TRIM43-201ENST00000272395 DDX39AO00148 427 aaKnown RBP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 MSCO60682 206 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 ADAMTS4O75173 837 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 KCNA2P16389 499 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 FERP16591 822 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 HOXD13P35453 343 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 MATR3P43243 847 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 CASP5P51878 434 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 NPEPPSP55786 919 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 JAM2P57087 298 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 PTK2Q05397 1052 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 ITGB3BPQ13352 177 aaPredicted RBP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 RPS6KA1Q15418 735 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 CELF3Q5SZQ8 465 aaKnown RBP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 CYFIP1Q7L576 1253 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 SRLQ86TD4 932 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 CD302Q8IX05 232 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 GSPT2Q8IYD1 628 aaKnown RBP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 SYCE1Q8N0S2 351 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 USP38Q8NB14 1042 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 ACTRT1Q8TDG2 376 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 AFG1LQ8WV93 481 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 AP5M1Q9H0R1 490 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 UPF3AQ9H1J1 476 aaKnown RBP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 NAGPAQ9UK23 515 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 TMEM59LQ9UK28 342 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 OGDHLQ9ULD0 1010 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 NENFQ9UMX5 172 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 RRP15Q9Y3B9 282 aaKnown RBP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 MSH4O15457 936 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 CAPN15O75808 1086 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 GH1P01241 217 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 CCDC172P0C7W6 258 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 MYBP10242 640 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 MNX1P50219 401 aaPredicted RBP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 GJA9P57773 515 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 PSMC6P62333 389 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 SKOR1P84550 965 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 SLC7A5Q01650 507 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 PPP2R5CQ13362 524 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 CUL1Q13616 776 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 FSCN1Q16658 493 aaKnown RBP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 EMC10Q5UCC4 262 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 NIPA1Q7RTP0 329 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 LRRC57Q8N9N7 239 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 SLC35C1Q96A29 364 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 SPATA33Q96N06 139 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 PSMB7Q99436 277 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 EIF2AK1Q9BQI3 630 aaKnown RBP9.45□□□□□ -0.9
TRIM43-201ENST00000272395 ZNF577Q9BSK1 485 aa9.45□□□□□ -0.9
TRIM43-201ENST00000272395 CCDC188H7C350 402 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 MYO1CO00159 1063 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 IPO5O00410 1097 aaKnown RBP9.44□□□□□ -0.9
TRIM43-201ENST00000272395 AKAP3O75969 853 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 FARP2O94887 1054 aaPredicted RBP9.44□□□□□ -0.9
TRIM43-201ENST00000272395 HEXIM1O94992 359 aaKnown RBP9.44□□□□□ -0.9
TRIM43-201ENST00000272395 KIF4AO95239 1232 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 FTCDO95954 541 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 GLI1P08151 1106 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 H2AFZP0C0S5 128 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 TGFB3P10600 412 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 SLC9A1P19634 815 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 PSMC2P35998 433 aaKnown RBP9.44□□□□□ -0.9
TRIM43-201ENST00000272395 SETQ01105 290 aaPredicted RBP9.44□□□□□ -0.9
TRIM43-201ENST00000272395 ARID5AQ03989 594 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 MYBPC2Q14324 1141 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 CLUL1Q15846 466 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 KCNA10Q16322 511 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 HSDL1Q3SXM5 330 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 DNAJC21Q5F1R6 531 aaKnown RBP9.44□□□□□ -0.9
TRIM43-201ENST00000272395 CFAP58Q5T655 872 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 ALKBH5Q6P6C2 394 aaKnown RBP9.44□□□□□ -0.9
TRIM43-201ENST00000272395 KCNV1Q6PIU1 500 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 H2AFVQ71UI9 128 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 ZNF571Q7Z3V5 609 aaPredicted RBP9.44□□□□□ -0.9
TRIM43-201ENST00000272395 SLFN11Q7Z7L1 901 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 IQCKQ8N0W5 287 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 KLHDC9Q8NEP7 349 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 PPP1R13LQ8WUF5 828 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 VTI1AQ96AJ9 217 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 BORCS6Q96GS4 357 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 MS4A14Q96JA4 679 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 CDHR1Q96JP9 859 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 GDAP1L1Q96MZ0 367 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 HSD17B14Q9BPX1 270 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 RASSF4Q9H2L5 321 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 BHMT2Q9H2M3 363 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 SIX2Q9NPC8 291 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 ODF2LQ9ULJ1 636 aa9.44□□□□□ -0.9
TRIM43-201ENST00000272395 MKI67P46013 3256 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms