RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 FAM20AQ96MK3 541 aa17.16■□□□□ 0.34
MAP1LC3B-201ENST00000268607 TRIM51Q9BSJ1 452 aa17.16■□□□□ 0.34
MAP1LC3B-201ENST00000268607 TLDC2A0PJX2 215 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 DDX39AO00148 427 aaKnown RBP17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 GSTA1P08263 222 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 ZNF268Q14587 947 aaPredicted RBP17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 TBC1D25Q3MII6 688 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 TRMT1LQ7Z2T5 733 aaKnown RBP17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 TRPM8Q7Z2W7 1104 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 PIGWQ7Z7B1 504 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 SYT2Q8N9I0 419 aaPredicted RBP17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 RANBP17Q9H2T7 1088 aaKnown RBP17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 ABCF3Q9NUQ8 709 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 COL20A1Q9P218 1284 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 FEM1BQ9UK73 627 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 TBX3O15119 743 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 ASAP2O43150 1006 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 NR2F2P24468 414 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 CIITAP33076 1130 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 ASIC2Q16515 512 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 LRRC57Q8N9N7 239 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 ATXN2LQ8WWM7 1075 aaKnown RBP17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 DYDC2Q96IM9 177 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 SAMD15Q9P1V8 674 aa17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.15■□□□□ 0.34
MAP1LC3B-201ENST00000268607 A6NHS1 94 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 CLIC2O15247 247 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 AHCYL1O43865 530 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 RTN3O95197 1032 aaPredicted RBP17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 ARP10275 920 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 NEFHP12036 1026 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 HOXD13P35453 343 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 PAPOLAP51003 745 aaKnown RBP17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 PTK2Q05397 1052 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 ITIH4Q14624 930 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 ERICH1Q86X53 443 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 KSR1Q8IVT5 923 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 PRMT1Q99873 361 aaKnown RBP17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 NMRK2Q9NPI5 230 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 PAPOLBQ9NRJ5 636 aaKnown RBP17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 UTP11Q9Y3A2 253 aaKnown RBP17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 RABGAP1Q9Y3P9 1069 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 AFG3L2Q9Y4W6 797 aa17.14■□□□□ 0.34
MAP1LC3B-201ENST00000268607 VIMP08670 466 aaKnown RBP17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ZBTB48P10074 688 aaPredicted RBP17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 NSMFQ6X4W1 530 aa17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 GADL1Q6ZQY3 521 aa17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 OTOP1Q7RTM1 612 aa17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ADAM7Q9H2U9 754 aa17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 A8MUI8 341 aa17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CCDC188H7C350 402 aa17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 WDR46O15213 610 aaKnown RBP17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 GRIN3BO60391 1043 aa17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ATP4AP20648 1035 aa17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 FMO2Q99518 471 aa17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CSADQ9Y600 493 aa17.14■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CFAP73A6NFT4 308 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PIK3CDO00329 1044 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SLITRK3O94933 977 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 GCNT3O95395 438 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 IFNAR2P48551 515 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CTCFP49711 727 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ALDH5A1P51649 535 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 IFI35P80217 286 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ANKRD20A2Q5SQ80 823 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ANKRD20A1Q5TYW2 823 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ANKRD20A3Q5VUR7 823 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PEX26Q7Z412 305 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 AIPL1Q9NZN9 384 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ZFATQ9P243 1243 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CTDP1Q9Y5B0 961 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 VWA5AO00534 786 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 EVI5O60447 810 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SORBS3O60504 671 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PPFIA2O75334 1257 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 UBOX5O94941 541 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PYGLP06737 847 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 GNAT1P11488 350 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ACTN1P12814 892 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 NQO1P15559 274 aaKnown RBP17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 EIF3BP55884 814 aaKnown RBP17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PDCD2Q16342 344 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ZNF571Q7Z3V5 609 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 HOOK3Q86VS8 718 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TRIM59Q8IWR1 403 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 IL31RAQ8NI17 732 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 TSC22D3Q99576 134 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 OSBPL1AQ9BXW6 950 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 FAM114A2Q9NRY5 505 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 WRAP73Q9P2S5 460 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PPP1R9AQ9ULJ8 1098 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 NR2E1Q9Y466 385 aa17.13■□□□□ 0.33
MAP1LC3B-201ENST00000268607 PITPNM2Q9BZ72 1349 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CETN3O15182 167 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 GAS7O60861 476 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 SMIM24O75264 130 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CYP3A4P08684 503 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 ALADP13716 330 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 MMP13P45452 471 aa17.12■□□□□ 0.33
MAP1LC3B-201ENST00000268607 CASP4P49662 377 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms