RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TRAIPQ9BWF2 469 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 ZWILCHQ9H900 591 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 ADAM22Q9P0K1 906 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 INO80B-WBP1J3KQ70 363 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 K7ERI5 159 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 C21orf2O43822 256 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 CPP00450 1065 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 P4HBP07237 508 aaKnown RBP12.3□□□□□ -0.44
VPS33A-201ENST00000267199 P4HA1P13674 534 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 SSTR3P32745 418 aaPredicted RBP12.3□□□□□ -0.44
VPS33A-201ENST00000267199 QARSP47897 775 aaKnown RBP12.3□□□□□ -0.44
VPS33A-201ENST00000267199 GPS1Q13098 491 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 CDC42EP5Q6NZY7 148 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 EPS8L3Q8TE67 593 aaKnown RBP12.3□□□□□ -0.44
VPS33A-201ENST00000267199 INO80BQ9C086 356 aaPredicted RBP12.3□□□□□ -0.44
VPS33A-201ENST00000267199 FIS1Q9Y3D6 152 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 MON2Q7Z3U7 1717 aa12.3□□□□□ -0.44
VPS33A-201ENST00000267199 DENND3A2RUS2 1198 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 COPEO14579 308 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 MCF2LO15068 1137 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 AARSP49588 968 aaKnown RBP eCLIP12.29□□□□□ -0.44
VPS33A-201ENST00000267199 DARS2Q6PI48 645 aaKnown RBP12.29□□□□□ -0.44
VPS33A-201ENST00000267199 DNAJC9Q8WXX5 260 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 RNF34Q969K3 372 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 FAM81BQ96LP2 452 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 PFDN4Q9NQP4 134 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 SYNJ2BP-COX16A0A087WUM0 186 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 FMO5P49326 533 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 SLC12A2P55011 1212 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 SNX16P57768 344 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 SATB1Q01826 763 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 PDIA2Q13087 525 aaKnown RBP12.29□□□□□ -0.44
VPS33A-201ENST00000267199 DNAJC3Q13217 504 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 KRT80Q6KB66 452 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
VPS33A-201ENST00000267199 NDE1Q9NXR1 346 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 COX16Q9P0S2 106 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 UBOX5O94941 541 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 CYP11B2P19099 503 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 OSTNP61366 133 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 KDSRQ06136 332 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 HAUS6Q7Z4H7 955 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 TRIM42Q8IWZ5 723 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 CCT6BQ92526 530 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 KLF6Q99612 283 aaPredicted RBP12.29□□□□□ -0.44
VPS33A-201ENST00000267199 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
VPS33A-201ENST00000267199 TRABDQ9H4I3 376 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 UBN1Q9NPG3 1134 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 SUGT1Q9Y2Z0 365 aa12.29□□□□□ -0.44
VPS33A-201ENST00000267199 ATMINO43313 823 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-201ENST00000267199 KCNA3P22001 575 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 RPA1P27694 616 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 RPS6KA2Q15349 733 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 ZBTB33Q86T24 672 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 NCAPG2Q86XI2 1143 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 TRIML2Q8N7C3 387 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 KIAA0895Q8NCT3 520 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 AENQ8WTP8 325 aaKnown RBP12.28□□□□□ -0.44
VPS33A-201ENST00000267199 SNF8Q96H20 258 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 AGPAT1Q99943 283 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 DUSP9Q99956 384 aaKnown RBP12.28□□□□□ -0.44
VPS33A-201ENST00000267199 FAM213AQ9BRX8 229 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 STK33Q9BYT3 514 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 TARSP26639 723 aaKnown RBP12.28□□□□□ -0.44
VPS33A-201ENST00000267199 SERPINB4P48594 390 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 CTCFP49711 727 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-201ENST00000267199 IGBP1P78318 339 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 EPHA7Q15375 998 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 EAPPQ56P03 285 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-201ENST00000267199 TTMPQ5BVD1 217 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 SLC10A5Q5PT55 438 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 EEPD1Q7L9B9 569 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 CATSPER3Q86XQ3 398 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 CRLF3Q8IUI8 442 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 ANKMY2Q8IV38 441 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 FBXO25Q8TCJ0 367 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 SLC26A7Q8TE54 656 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 KLHL11Q9NVR0 708 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 CLEC11AQ9Y240 323 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 IQANK1A0A1B0GTG1 560 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 LRRC10BA6NIK2 292 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 WDR64B1ANS9 1081 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 PGM1P36871 562 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 COPS2P61201 443 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 RABGAP1LQ5R372 815 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 KLHDC7AQ5VTJ3 777 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 SLC30A5Q8TAD4 765 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 CDKL2Q92772 493 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 APEX2Q9UBZ4 518 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 NVLO15381 856 aaKnown RBP12.28□□□□□ -0.44
VPS33A-201ENST00000267199 CYP26A1O43174 497 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 UBTFL6P0CB48 400 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-201ENST00000267199 ITGA4P13612 1032 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 NQO1P15559 274 aaKnown RBP12.28□□□□□ -0.44
VPS33A-201ENST00000267199 KRT39Q6A163 491 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 SCARA5Q6ZMJ2 495 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 PCGF5Q86SE9 256 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 AFAP1L2Q8N4X5 818 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 PPM1NQ8N819 430 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms