RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 EPHX2P34913 555 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 SREBF1P36956 1147 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 ACTR2P61160 394 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 E4F1Q66K89 784 aaPredicted RBP16.41■□□□□ 0.22
TIMP3-201ENST00000266085 WDR24Q96S15 920 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 ARP10275 920 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 CYP11B2P19099 503 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 SLC9A1P19634 815 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 ADORA2BP29275 332 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 RFC5P40937 340 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 GRB10Q13322 594 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 FAF2Q96CS3 445 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 TARS2Q9BW92 718 aaKnown RBP16.41■□□□□ 0.22
TIMP3-201ENST00000266085 ARL4CP56559 192 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 HDAC11Q96DB2 347 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 WNT8AQ9H1J5 351 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 NFIBO00712 420 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 CHRNA3P32297 505 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 CCZ1BP86790 482 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 CCZ1P86791 482 aaPredicted RBP16.4■□□□□ 0.22
TIMP3-201ENST00000266085 FAM102AQ5T9C2 384 aaPredicted RBP16.4■□□□□ 0.22
TIMP3-201ENST00000266085 CC2D1AQ6P1N0 951 aaPredicted RBP16.4■□□□□ 0.22
TIMP3-201ENST00000266085 RASGRP2Q7LDG7 609 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 GMCL1P1Q8NEA9 526 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 ZNF560Q96MR9 790 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 UNC45AQ9H3U1 944 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 SAYSD1Q9NPB0 183 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 GRID2IPA4D2P6 1211 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 HBP1O60381 514 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 CCDC38Q502W7 563 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.4■□□□□ 0.22
TIMP3-201ENST00000266085 URGCPQ8TCY9 931 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 SNX9Q9Y5X1 595 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 MED24O75448 989 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 MMP14P50281 582 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 NCOA4Q13772 614 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 GNASQ5JWF2 1037 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 NUDT12Q9BQG2 462 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 MKNK1Q9BUB5 465 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 AK9Q5TCS8 1911 aa16.4■□□□□ 0.22
TIMP3-201ENST00000266085 ATP1A1P05023 1023 aaKnown RBP16.39■□□□□ 0.22
TIMP3-201ENST00000266085 CLTAP09496 248 aa16.39■□□□□ 0.22
TIMP3-201ENST00000266085 PHLDB3Q6NSJ2 640 aa16.39■□□□□ 0.22
TIMP3-201ENST00000266085 EFCAB12Q6NXP0 572 aa16.39■□□□□ 0.22
TIMP3-201ENST00000266085 MOXD1Q6UVY6 613 aa16.39■□□□□ 0.22
TIMP3-201ENST00000266085 IDI2Q9BXS1 227 aa16.39■□□□□ 0.22
TIMP3-201ENST00000266085 GPBP1L1Q9HC44 474 aaPredicted RBP16.39■□□□□ 0.22
TIMP3-201ENST00000266085 KCNH4Q9UQ05 1017 aa16.39■□□□□ 0.22
TIMP3-201ENST00000266085 PLAAQ9Y263 795 aa16.39■□□□□ 0.22
TIMP3-201ENST00000266085 ESYT3A0FGR9 886 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 PPP1R3GB7ZBB8 358 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 KRT37O76014 449 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 CYP2C9P11712 490 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 SCP2P22307 547 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 KPNA2P52292 529 aaKnown RBP16.39■□□□□ 0.21
TIMP3-201ENST00000266085 CDC42EP1Q00587 391 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 TRIM59Q8IWR1 403 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 CFAP61Q8NHU2 1237 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 NUDCD1Q96RS6 583 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 KLHL8Q9P2G9 620 aaPredicted RBP16.39■□□□□ 0.21
TIMP3-201ENST00000266085 TXNDC9O14530 226 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 ASAP2O43150 1006 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 EPHB1P54762 984 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 CAV1Q03135 178 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 SEPT6Q14141 434 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 GRIK5Q16478 980 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 DCLK2Q8N568 766 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 TC2NQ8N9U0 490 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 RDM1Q8NG50 284 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 TTC1Q99614 292 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 KIFC3Q9BVG8 833 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 MRFAP1Q9Y605 127 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 IQANK1A0A1B0GTG1 560 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 EIF3DO15371 548 aaKnown RBP eCLIP16.39■□□□□ 0.21
TIMP3-201ENST00000266085 TCF7P36402 384 aaPredicted RBP16.39■□□□□ 0.21
TIMP3-201ENST00000266085 IER5Q5VY09 327 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 ZFPM1Q8IX07 1006 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 SPATA4Q8NEY3 305 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.39■□□□□ 0.212e-6■■■■■ 54.9
TIMP3-201ENST00000266085 FHOD1Q9Y613 1164 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 IGSF9BQ9UPX0 1349 aa16.39■□□□□ 0.21
TIMP3-201ENST00000266085 ZBBXA8MT70 800 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 BNIP3LO60238 219 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 FBXL16Q8N461 479 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 CFAP36Q96G28 342 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 EVI5O60447 810 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 RTN2O75298 545 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 PGK2P07205 417 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 BCAR1P56945 870 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 LAMC2Q13753 1193 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 RAB44Q7Z6P3 723 aaPredicted RBP16.38■□□□□ 0.21
TIMP3-201ENST00000266085 TEX2Q8IWB9 1127 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 KATNAL1Q9BW62 490 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 KIF9Q9HAQ2 790 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 PARVAQ9NVD7 372 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 TTC7AQ9ULT0 858 aaPredicted RBP16.38■□□□□ 0.21
TIMP3-201ENST00000266085 RSPH10B2B2RC85 870 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 RSPH10BP0C881 870 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 TACO1Q9BSH4 297 aaKnown RBP16.38■□□□□ 0.21
TIMP3-201ENST00000266085 RUSC1Q9BVN2 902 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms