RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TOM1L1O75674 476 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 CNMDO75829 334 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 FAM228BP0C875 321 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 GARTP22102 1010 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 LACTBP83111 547 aaPredicted RBP10.05□□□□□ -0.8
SSR3-201ENST00000265044 BEX3Q00994 111 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 PPP3CAQ08209 521 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 DRP2Q13474 957 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 CAPSQ13938 189 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 MYBPC2Q14324 1141 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 SLC18A3Q16572 532 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 WDR59Q6PJI9 974 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 TMEM270Q6UE05 265 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 SV2AQ7L0J3 742 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 TLK2Q86UE8 772 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 DNAAF5Q86Y56 855 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 TAS1R2Q8TE23 839 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 LACRTQ9GZZ8 138 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 TMEM8AQ9HCN3 771 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 HDAC6Q9UBN7 1215 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 SRGAP2O75044 1071 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 GPC3P51654 580 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 NCKAP1LP55160 1127 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 DUOXA2Q1HG44 320 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 IQSEC1Q6DN90 963 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 TMEM139Q8IV31 216 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 PARD3BQ8TEW8 1205 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 HINFPQ9BQA5 517 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 CCDC94Q9BW85 323 aaPredicted RBP10.05□□□□□ -0.8
SSR3-201ENST00000265044 GCOM2Q9BZD3 368 aaPredicted RBP10.05□□□□□ -0.8
SSR3-201ENST00000265044 TMEM117Q9H0C3 514 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 PLCB1Q9NQ66 1216 aa10.05□□□□□ -0.8
SSR3-201ENST00000265044 SSC5DA1L4H1 1573 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 KCNK3O14649 394 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 THAP12O43422 761 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 MAFO75444 373 aaPredicted RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 TRPA1O75762 1119 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 GPS2Q13227 327 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 TMEM63BQ5T3F8 832 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 FOXR2Q6PJQ5 311 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 PLPPR4Q7Z2D5 763 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 MTERF4Q7Z6M4 381 aaKnown RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 ZSWIM2Q8NEG5 633 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 MS4A4AQ96JQ5 239 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 PLEKHA4Q9H4M7 779 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 DHX33Q9H6R0 707 aaKnown RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 UNCXA6NJT0 531 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 TBC1D8O95759 1140 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 HLA-DRAP01903 254 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 ADRB2P07550 413 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 GNAT1P11488 350 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 SSTR3P32745 418 aaPredicted RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 CYP24A1Q07973 514 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 SURF1Q15526 300 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 RSPH3Q86UC2 560 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 RPUSD2Q8IZ73 545 aaKnown RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 GOLGA6L1Q8N7Z2 621 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 SMC1BQ8NDV3 1235 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 RAET1EQ8TD07 263 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 LENG1Q96BZ8 264 aaPredicted RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 ST7Q9NRC1 585 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 PRMT7Q9NVM4 692 aaPredicted RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 SIPA1L1O43166 1804 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 KIAA0391O15091 583 aaKnown RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 CTSHP09668 335 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 FGFR4P22455 802 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 NSFP46459 744 aaKnown RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 CPT1AP50416 773 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 BPIFB4P59827 614 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 GRIK4Q16099 956 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 TWF2Q6IBS0 349 aaKnown RBP10.04□□□□□ -0.8
SSR3-201ENST00000265044 JRKLQ9Y4A0 524 aa10.04□□□□□ -0.8
SSR3-201ENST00000265044 MARSP56192 900 aaKnown RBP10.03□□□□□ -0.8
SSR3-201ENST00000265044 NCOA4Q13772 614 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 TUBB2AQ13885 445 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 MESDQ14696 234 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 ZNF699Q32M78 642 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 CST9Q5W186 159 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 PASD1Q8IV76 773 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 SLC9A9Q8IVB4 645 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 ZNF653Q96CK0 615 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 CPB2Q96IY4 423 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 TUBB2BQ9BVA1 445 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 AMFRQ9UKV5 643 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 GTPBP10A4D1E9 387 aaKnown RBP10.03□□□□□ -0.8
SSR3-201ENST00000265044 IGF2BP3O00425 579 aaKnown RBP eCLIP10.03□□□□□ -0.87e-7■■■■□ 21.1
SSR3-201ENST00000265044 OGTO15294 1046 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 PALMO75781 387 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 RARBP10826 455 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 P4HA1P13674 534 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 CETN2P41208 172 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 BMS1Q14692 1282 aaKnown RBP10.03□□□□□ -0.8
SSR3-201ENST00000265044 DUSP28Q4G0W2 176 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 SAPCD2Q86UD0 394 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 PTPN18Q99952 460 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 PIN4Q9Y237 131 aaKnown RBP10.03□□□□□ -0.8
SSR3-201ENST00000265044 USTQ9Y2C2 406 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 HYOU1Q9Y4L1 999 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 RRN3P2A6NIE6 340 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms