RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ZC3H12BQ5HYM0 836 aaKnown RBP12.77□□□□□ -0.37
SMG6-201ENST00000263073 FAM196AQ6ZSG2 479 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 TMEM35BQ8NCS4 154 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 ZBTB10Q96DT7 871 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 VPS39Q96JC1 886 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 AGPAT1Q99943 283 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 WNT8AQ9H1J5 351 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 SLITRK6Q9H5Y7 841 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 SENP2Q9HC62 589 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 FAM187AA6NFU0 413 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 hCG_1984214I3L0E3 225 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 MOCS2O96007 188 aaPredicted RBP12.77□□□□□ -0.37
SMG6-201ENST00000263073 PLEKP08567 350 aaPredicted RBP12.77□□□□□ -0.37
SMG6-201ENST00000263073 AARSP49588 968 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMG6-201ENST00000263073 MRPS15P82914 257 aaKnown RBP12.77□□□□□ -0.37
SMG6-201ENST00000263073 NR1H3Q13133 447 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 NBPF20Q3BBV1 942 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 ARL13BQ3SXY8 428 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 HEATR6Q6AI08 1181 aaKnown RBP12.77□□□□□ -0.37
SMG6-201ENST00000263073 GJB7Q6PEY0 223 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 RASGRP2Q7LDG7 609 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 ADGRF4Q8IZF3 695 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 ZNF713Q8N859 430 aaPredicted RBP12.77□□□□□ -0.37
SMG6-201ENST00000263073 THAP11Q96EK4 314 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 CLMNQ96JQ2 1002 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 IL25Q9H293 177 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 PCMTD2Q9NV79 361 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 RGL1Q9NZL6 768 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 SLC12A6Q9UHW9 1150 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 STK36Q9NRP7 1315 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 AIM2O14862 343 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 GYS1P13807 737 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 CAV1Q03135 178 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 CACNB2Q08289 660 aaPredicted RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 OVGP1Q12889 678 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 HIF1AQ16665 826 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 FAM102AQ5T9C2 384 aaPredicted RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 SRBD1Q8N5C6 995 aaKnown RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 RFFLQ8WZ73 363 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 DHX38Q92620 1227 aaKnown RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 ACSF2Q96CM8 615 aaPredicted RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 IL1RL2Q9HB29 575 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 LCP1P13796 627 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 CDH6P55285 790 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 NR1I3Q14994 352 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 ATP11CQ8NB49 1132 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 PI4KBQ9UBF8 816 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 TMEM120BA0PK00 339 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 ARHGAP10A1A4S6 786 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 KCNN4O15554 427 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 AKAP10O43572 662 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 XPOTO43592 962 aaKnown RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 PAMP19021 973 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 IL6STP40189 918 aaPredicted RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 GRIN1Q05586 938 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 TMEM117Q9H0C3 514 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 H7C1W4 665 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 ADCY3O60266 1144 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 SERPINB3P29508 390 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 NEK2P51955 445 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 SKOR1P84550 965 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 KLC1Q07866 573 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 MXD4Q14582 209 aaPredicted RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 ARHGAP27Q6ZUM4 889 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 IFNEQ86WN2 208 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 SEPT8Q92599 483 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 INPP5DQ92835 1189 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 IFT43Q96FT9 208 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 NAF1Q96HR8 494 aaKnown RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 CNBD2Q96M20 576 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 NR1H4Q96RI1 486 aaPredicted RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 HSPBP1Q9NZL4 362 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 SLC13A4Q9UKG4 626 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 TYW5A2RUC4 315 aaKnown RBP12.76□□□□□ -0.37
SMG6-201ENST00000263073 GYPCP04921 128 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 ZNF568Q3ZCX4 644 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 SIK2Q9H0K1 926 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 IP6K2Q9UHH9 426 aa12.76□□□□□ -0.37
SMG6-201ENST00000263073 LOC100653049A0A140TA62 436 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 DFFAO00273 331 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 KRT34O76011 436 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 CCDC159P0C7I6 412 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 SWSAP1Q6NVH7 229 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 RHOT1Q8IXI2 618 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 TAGAPQ8N103 731 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 DNAJC9Q8WXX5 260 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 PIGBQ92521 554 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 MLH1P40692 756 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 GPC3P51654 580 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 GALCP54803 685 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 EIF3EP60228 445 aaKnown RBP12.75□□□□□ -0.37
SMG6-201ENST00000263073 NFX1Q12986 1120 aaKnown RBP12.75□□□□□ -0.37
SMG6-201ENST00000263073 LAYNQ6UX15 382 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.75□□□□□ -0.372e-6■■■■■ 54.9
SMG6-201ENST00000263073 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 GSG1L2A8MUP6 293 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 MAP4P27816 1152 aaKnown RBP12.75□□□□□ -0.37
SMG6-201ENST00000263073 TRPC1P48995 793 aa12.75□□□□□ -0.37
SMG6-201ENST00000263073 ATP2C1P98194 919 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms