RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 MIGA2Q7L4E1 593 aa15.14■□□□□ 0.01
SCARF1-201ENST00000263071 REEP2Q9BRK0 252 aa15.14■□□□□ 0.01
SCARF1-201ENST00000263071 CENPKQ9BS16 269 aa15.14■□□□□ 0.01
SCARF1-201ENST00000263071 FAM129AQ9BZQ8 928 aa15.14■□□□□ 0.01
SCARF1-201ENST00000263071 ARHGEF38Q9NXL2 777 aa15.14■□□□□ 0.01
SCARF1-201ENST00000263071 LARSQ9P2J5 1176 aaKnown RBP15.14■□□□□ 0.01
SCARF1-201ENST00000263071 TBK1Q9UHD2 729 aa15.14■□□□□ 0.01
SCARF1-201ENST00000263071 GGA1Q9UJY5 639 aa15.14■□□□□ 0.01
SCARF1-201ENST00000263071 SLIT2O94813 1529 aa15.14■□□□□ 0.01
SCARF1-201ENST00000263071 E7ENQ6 273 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 ASAP2O43150 1006 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 PPP1R11O60927 126 aaPredicted RBP15.13■□□□□ 0.01
SCARF1-201ENST00000263071 ATP9AO75110 1047 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 FAM13AO94988 1023 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 PTDSS1P48651 473 aaKnown RBP15.13■□□□□ 0.01
SCARF1-201ENST00000263071 TMEM53Q6P2H8 277 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 LRIG3Q6UXM1 1119 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 PALB2Q86YC2 1186 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 MREGQ8N565 214 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 SPZ1Q9BXG8 430 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 RIC8AQ9NPQ8 531 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 SCAF8Q9UPN6 1271 aaKnown RBP15.13■□□□□ 0.01
SCARF1-201ENST00000263071 PKD1L3Q7Z443 1732 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 COL4A1P02462 1669 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 SORBS3O60504 671 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 SSTR3P32745 418 aaPredicted RBP15.13■□□□□ 0.01
SCARF1-201ENST00000263071 PDE6CP51160 858 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 LENG1Q96BZ8 264 aaPredicted RBP15.13■□□□□ 0.01
SCARF1-201ENST00000263071 FAM84AQ96KN4 292 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 CATSPER2Q96P56 530 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 PLCB1Q9NQ66 1216 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 SLC4A7Q9Y6M7 1214 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 AFPP02771 609 aaKnown RBP15.13■□□□□ 0.01
SCARF1-201ENST00000263071 SHBGP04278 402 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 PAEPP09466 180 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 UBTFL6P0CB48 400 aaPredicted RBP15.13■□□□□ 0.01
SCARF1-201ENST00000263071 ZCCHC18P0CG32 403 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 TNFRSF8P28908 595 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 ITIH3Q06033 890 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 MEI1Q5TIA1 1274 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 FAM196AQ6ZSG2 479 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 SCUBE1Q8IWY4 988 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 TAB3Q8N5C8 712 aaPredicted RBP15.13■□□□□ 0.01
SCARF1-201ENST00000263071 RBBP8NLQ8NC74 664 aaPredicted RBP15.13■□□□□ 0.01
SCARF1-201ENST00000263071 BTBD6Q96KE9 485 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 FAM114A2Q9NRY5 505 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 MTMR4Q9NYA4 1195 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 NAGPAQ9UK23 515 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 COMMD3-BMI1R4GMX3 469 aa15.13■□□□□ 0.01
SCARF1-201ENST00000263071 SUN1O94901 812 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 BCRP11274 1271 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 GALCP54803 685 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 MTTPP55157 894 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 ADARP55265 1226 aaKnown RBP15.12■□□□□ 0.01
SCARF1-201ENST00000263071 HDAC4P56524 1084 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 NFIAQ12857 509 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 CCDC174Q6PII3 467 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 SLC15A3Q8IY34 581 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 DNAJC19Q96DA6 116 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 IQCDQ96DY2 449 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 MTMR9Q96QG7 549 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 RTFDC1Q9BY42 306 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-201ENST00000263071 MAGEF1Q9HAY2 307 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 INTS9Q9NV88 658 aaKnown RBP15.12■□□□□ 0.01
SCARF1-201ENST00000263071 TUBA8Q9NY65 449 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-201ENST00000263071 DBR1Q9UK59 544 aaKnown RBP15.12■□□□□ 0.01
SCARF1-201ENST00000263071 ITGB1BP2Q9UKP3 347 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 AMFRQ9UKV5 643 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 FRMD4BQ9Y2L6 1034 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 TNFAIP3P21580 790 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 NFKBIAP25963 317 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 PLOD1Q02809 727 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-201ENST00000263071 QRICH1Q2TAL8 776 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 C2CD6Q53TS8 623 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 HP1BP3Q5SSJ5 553 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-201ENST00000263071 ERMARDQ5T6L9 678 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 PPFIBP2Q8ND30 876 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 DYDC2Q96IM9 177 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 TSKSQ9UJT2 592 aa15.12■□□□□ 0.01
SCARF1-201ENST00000263071 CALCAP01258 141 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 ITGA2BP08514 1039 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 CHN1P15882 459 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 PLCG2P16885 1265 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 PPP1R2P41236 205 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 STAT1P42224 750 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 ZNF844Q08AG5 666 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 CATSPER3Q86XQ3 398 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 ZFPM1Q8IX07 1006 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 PDCD7Q8N8D1 485 aaKnown RBP15.11■□□□□ 0.01
SCARF1-201ENST00000263071 GDAP1Q8TB36 358 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 RBM46Q8TBY0 533 aaKnown RBP15.11■□□□□ 0.01
SCARF1-201ENST00000263071 DDX4Q9NQI0 724 aaKnown RBP15.11■□□□□ 0.01
SCARF1-201ENST00000263071 TAS2R14Q9NYV8 317 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 ACSL3O95573 720 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 DMPKQ09013 629 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 UBAP2Q5T6F2 1119 aaKnown RBP15.11■□□□□ 0.01
SCARF1-201ENST00000263071 AGBL2Q5U5Z8 902 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 ERMNQ8TAM6 284 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 AGBL1Q96MI9 1066 aa15.11■□□□□ 0.01
SCARF1-201ENST00000263071 DDX50Q9BQ39 737 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms