RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 HIPK3Q9H422 1215 aa30.01■■■□□ 2.39
SMARCD3-201ENST00000262188 DMAC2Q9NW81 257 aa30.01■■■□□ 2.39
SMARCD3-201ENST00000262188 ST3GAL5Q9UNP4 418 aa30.01■■■□□ 2.39
SMARCD3-201ENST00000262188 AP5Z1O43299 807 aa30■■■□□ 2.39
SMARCD3-201ENST00000262188 AKAP3O75969 853 aa30■■■□□ 2.39
SMARCD3-201ENST00000262188 CYP2C18P33260 490 aa30■■■□□ 2.39
SMARCD3-201ENST00000262188 ABCD1P33897 745 aa30■■■□□ 2.39
SMARCD3-201ENST00000262188 CDKAL1Q5VV42 579 aa30■■■□□ 2.39
SMARCD3-201ENST00000262188 ZPBP2Q6X784 338 aa30■■■□□ 2.39
SMARCD3-201ENST00000262188 TSHZ1Q6ZSZ6 1077 aa30■■■□□ 2.39
SMARCD3-201ENST00000262188 ZNF771Q7L3S4 317 aaPredicted RBP30■■■□□ 2.39
SMARCD3-201ENST00000262188 CAGE1Q8TC20 777 aa30■■■□□ 2.39
SMARCD3-201ENST00000262188 PTPRHQ9HD43 1115 aa30■■■□□ 2.39
SMARCD3-201ENST00000262188 PIN4Q9Y237 131 aaKnown RBP30■■■□□ 2.39
SMARCD3-201ENST00000262188 ZNF18P17022 549 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 SCP2P22307 547 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 PLCB2Q00722 1185 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 ZC3H3Q8IXZ2 948 aaKnown RBP29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 PLCD3Q8N3E9 789 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 CEP120Q8N960 986 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 TOM1L1O75674 476 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 SELPP16109 830 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 GPNMBQ14956 572 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 ZNF568Q3ZCX4 644 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 WNT8AQ9H1J5 351 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 PRDM5Q9NQX1 630 aaPredicted RBP29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 TMEM39AQ9NV64 488 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 PADI3Q9ULW8 664 aa29.99■■■□□ 2.39
SMARCD3-201ENST00000262188 CETN3O15182 167 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 CLDN3O15551 220 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 EXOC3O60645 756 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 PROZP22891 400 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 BFSP2Q13515 415 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 GOLGA5Q8TBA6 731 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 CNOT6LQ96LI5 555 aaKnown RBP29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 MSTO1Q9BUK6 570 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 AGPAT5Q9NUQ2 364 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 TBX21Q9UL17 535 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 TNFSF13BQ9Y275 285 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 STYXL1Q9Y6J8 313 aa29.98■■■□□ 2.39
SMARCD3-201ENST00000262188 RPLP2P05387 115 aaKnown RBP29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 CLTBP09497 229 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 ACOT2P49753 483 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 OSTNP61366 133 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 RBL2Q08999 1139 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 CBWD2Q8IUF1 395 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 FAM213AQ9BRX8 229 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 EIF2AQ9BY44 585 aaKnown RBP29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 CDT1Q9H211 546 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 A0A0B4J269 797 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 CAND2O75155 1236 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 MPZL3Q6UWV2 235 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 THAP9Q9H5L6 903 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 YY1AP1Q9H869 796 aa29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 AGO2Q9UKV8 859 aaKnown RBP29.97■■■□□ 2.39
SMARCD3-201ENST00000262188 A0A1B0GUA9 196 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 CCDC85CA6NKD9 419 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 KCNJ18B7U540 433 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 NBNO60934 754 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 ADRB2P07550 413 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 ITGB8P26012 769 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 TNFSF9P41273 254 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 KCNJ12Q14500 433 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 TMEM192Q8IY95 271 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 THNSL1Q8IYQ7 743 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 CCDC155Q8N6L0 562 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 SCN5AQ14524 2016 aa29.96■■■□□ 2.39
SMARCD3-201ENST00000262188 TRIM43BA6NCK2 446 aa29.95■■■□□ 2.39
SMARCD3-201ENST00000262188 RPL13P26373 211 aaKnown RBP29.95■■■□□ 2.39
SMARCD3-201ENST00000262188 PAK2Q13177 524 aa29.95■■■□□ 2.39
SMARCD3-201ENST00000262188 NFIL3Q16649 462 aa29.95■■■□□ 2.39
SMARCD3-201ENST00000262188 FOXR2Q6PJQ5 311 aa29.95■■■□□ 2.39
SMARCD3-201ENST00000262188 C12orf56Q8IXR9 622 aa29.95■■■□□ 2.39
SMARCD3-201ENST00000262188 XXYLT1Q8NBI6 393 aa29.95■■■□□ 2.39
SMARCD3-201ENST00000262188 ANKRD7Q92527 254 aa29.95■■■□□ 2.39
SMARCD3-201ENST00000262188 TRIM43Q96BQ3 446 aaPredicted RBP29.95■■■□□ 2.39
SMARCD3-201ENST00000262188 ERVK-5Q9HDB9 667 aa29.95■■■□□ 2.39
SMARCD3-201ENST00000262188 ALPK3Q96L96 1907 aa29.95■■■□□ 2.38
SMARCD3-201ENST00000262188 NPTXRO95502 500 aa29.95■■■□□ 2.38
SMARCD3-201ENST00000262188 GARTP22102 1010 aa29.95■■■□□ 2.38
SMARCD3-201ENST00000262188 MCL1Q07820 350 aa29.95■■■□□ 2.38
SMARCD3-201ENST00000262188 NOLC1Q14978 699 aaKnown RBP eCLIP29.95■■■□□ 2.38
SMARCD3-201ENST00000262188 SLC9A9Q8IVB4 645 aa29.95■■■□□ 2.38
SMARCD3-201ENST00000262188 TMX1Q9H3N1 280 aa29.95■■■□□ 2.38
SMARCD3-201ENST00000262188 PITPNM1O00562 1244 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 MGEA5O60502 916 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 TCP11X2Q5H9J9 407 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 CRELD2Q6UXH1 353 aaPredicted RBP29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 CEP63Q96MT8 703 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 TAB2Q9NYJ8 693 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 FAM189A1O60320 539 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 IBSPP21815 317 aaPredicted RBP29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 WNT7BP56706 349 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 PTPN21Q16825 1174 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 CCDC40Q4G0X9 1142 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 SLFN12LQ6IEE8 588 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 FILIP1Q7Z7B0 1213 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 FAM84AQ96KN4 292 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 HES2Q9Y543 173 aa29.94■■■□□ 2.38
SMARCD3-201ENST00000262188 SNRPFP62306 86 aaKnown RBP29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms