RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CNGA1P29973 690 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 RFC5P40937 340 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 SOX10P56693 466 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 SPATA1Q5VX52 437 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 EPM2AIP1Q7L775 607 aaPredicted RBP20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 TCP11Q8WWU5 503 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 SLC7A3Q8WY07 619 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 SAAL1Q96ER3 474 aa20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 TUT1Q9H6E5 874 aaKnown RBP20.47■□□□□ 0.87
COL4A3BP-201ENST00000261415 SEPT4O43236 478 aa20.46■□□□□ 0.87
COL4A3BP-201ENST00000261415 GCNT3O95395 438 aa20.46■□□□□ 0.87
COL4A3BP-201ENST00000261415 MYBP10242 640 aa20.46■□□□□ 0.87
COL4A3BP-201ENST00000261415 EPB41P11171 864 aaKnown RBP20.46■□□□□ 0.87
COL4A3BP-201ENST00000261415 NMT1P30419 496 aaKnown RBP20.46■□□□□ 0.87
COL4A3BP-201ENST00000261415 CPT1AP50416 773 aa20.46■□□□□ 0.87
COL4A3BP-201ENST00000261415 PXYLP1Q8TE99 480 aa20.46■□□□□ 0.87
COL4A3BP-201ENST00000261415 KIFAP3Q92845 792 aa20.46■□□□□ 0.87
COL4A3BP-201ENST00000261415 SEMA6BQ9H3T3 888 aa20.46■□□□□ 0.87
COL4A3BP-201ENST00000261415 CENPPQ6IPU0 288 aa20.46■□□□□ 0.87
COL4A3BP-201ENST00000261415 BICDL2A1A5D9 508 aa20.45■□□□□ 0.86
COL4A3BP-201ENST00000261415 CCND3P30281 292 aaPredicted RBP20.45■□□□□ 0.86
COL4A3BP-201ENST00000261415 NAP1L1P55209 391 aaKnown RBP20.45■□□□□ 0.86
COL4A3BP-201ENST00000261415 PDCD2Q16342 344 aaPredicted RBP20.45■□□□□ 0.86
COL4A3BP-201ENST00000261415 TTI2Q6NXR4 508 aa20.45■□□□□ 0.86
COL4A3BP-201ENST00000261415 MICAL1Q8TDZ2 1067 aa20.45■□□□□ 0.86
COL4A3BP-201ENST00000261415 BORCS6Q96GS4 357 aa20.45■□□□□ 0.86
COL4A3BP-201ENST00000261415 SELENOOQ9BVL4 669 aa20.45■□□□□ 0.86
COL4A3BP-201ENST00000261415 SCN10AQ9Y5Y9 1956 aa20.45■□□□□ 0.86
COL4A3BP-201ENST00000261415 SOWAHDA6NJG2 315 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 MAFO75444 373 aaPredicted RBP20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 PECAM1P16284 738 aaPredicted RBP20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 PRMT2P55345 433 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 BRDTQ58F21 947 aaPredicted RBP20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 MAP3K21Q5TCX8 1036 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 ANKRD40Q6AI12 368 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 ZNF720Q7Z2F6 126 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 NELFCDQ8IXH7 590 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 SAMSN1Q9NSI8 373 aaKnown RBP20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 WBP1LQ9NX94 342 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 EIF3DO15371 548 aaKnown RBP eCLIP20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 CLSTN1O94985 981 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 PEX3P56589 373 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 BEX3Q00994 111 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 AMPD2Q01433 879 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 MTF1Q14872 753 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 FSCN1Q16658 493 aaKnown RBP20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 BMT2Q1RMZ1 405 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 RNF187Q5TA31 235 aaPredicted RBP20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 TRAPPC12Q8WVT3 735 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 POLR3FQ9H1D9 316 aaPredicted RBP20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 C17orf75Q9HAS0 396 aa20.44■□□□□ 0.86
COL4A3BP-201ENST00000261415 K7ENM7 598 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 F2P00734 622 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 MAPTP10636 758 aaKnown RBP20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 RTP1P59025 263 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 ZC2HC1CQ53FD0 456 aaPredicted RBP20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 HSP90AA4PQ58FG1 418 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 CYB5D1Q6P9G0 228 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 TAX1BP1Q86VP1 789 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 ZNF507Q8TCN5 953 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 BSNDQ8WZ55 320 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 TMEM143Q96AN5 459 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 KIF9Q9HAQ2 790 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 TRIM17Q9Y577 477 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 C6orf222P0C671 652 aaPredicted RBP20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 RARBP10826 455 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 NEFHP12036 1026 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 INSRRP14616 1297 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 ZNF18P17022 549 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 GJA9P57773 515 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 DMP1Q13316 513 aaPredicted RBP20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 FILIP1LQ4L180 1135 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 ZNF484Q5JVG2 852 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 CDCA2Q69YH5 1023 aaPredicted RBP20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 RAD9BQ6WBX8 426 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 CCNI2Q6ZMN8 369 aaPredicted RBP20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 DUSP9Q99956 384 aaKnown RBP20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 EPN3Q9H201 632 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 KCTD10Q9H3F6 313 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 BRCA2P51587 3418 aa20.43■□□□□ 0.86
COL4A3BP-201ENST00000261415 COL1A2P08123 1366 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 UBE4BO95155 1302 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 PPP1R37O75864 691 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 HOXD13P35453 343 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 LRRC63Q05C16 580 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 ZCWPW2Q504Y3 356 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 STXBP4Q6ZWJ1 553 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 EXOC8Q8IYI6 725 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 SLAIN1Q8ND83 568 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 SPDL1Q96EA4 605 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 CCDC114Q96M63 670 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 STRA6Q9BX79 667 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 UPF3AQ9H1J1 476 aaKnown RBP20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 RABEP2Q9H5N1 569 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 IGKV6-21A0A0C4DH24 114 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 MYADML2A6NDP7 307 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 SRRM3A6NNA2 597 aaPredicted RBP20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 NPTX2P47972 431 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 RPS6KA3P51812 740 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms