RNA–Protein interactions for RNA: ENST00000259241.6

HS6ST1-201, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS6ST1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-201ENST00000259241 SNX25Q9H3E2 840 aa13.73□□□□□ -0.21
HS6ST1-201ENST00000259241 MKRN1Q9UHC7 482 aaKnown RBP13.73□□□□□ -0.21
HS6ST1-201ENST00000259241 CCDC188H7C350 402 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 PLSCR1O15162 318 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 NCOA4Q13772 614 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 GKAP1Q5VSY0 366 aaPredicted RBP13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 SH3BP5LQ7L8J4 393 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 TRAPPC12Q8WVT3 735 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 WDR18Q9BV38 432 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 MRPL4Q9BYD3 311 aaKnown RBP13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 A6NJR5 290 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 YDJCA8MPS7 323 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 ADM5C9JUS6 153 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 LDHAP00338 332 aaKnown RBP13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 PLA2G4AP47712 749 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 RARRES1P49788 294 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 GPC3P51654 580 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 GMCL1P1Q8NEA9 526 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 WHAMMQ8TF30 809 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 TBX20Q9UMR3 447 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 FNDC3AQ9Y2H6 1198 aaKnown RBP13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 M0QYV0 167 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 FGRP09769 529 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 DUOXA2Q1HG44 320 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 FAM47EQ6ZV65 393 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 ZC3H18Q86VM9 953 aaKnown RBP13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 FBXO16Q8IX29 292 aaPredicted RBP13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 SAYSD1Q9NPB0 183 aa13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 RRP15Q9Y3B9 282 aaKnown RBP13.72□□□□□ -0.21
HS6ST1-201ENST00000259241 ATP9AO75110 1047 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 CTSHP09668 335 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 SMTNL2Q2TAL5 461 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 DNAJC19Q96DA6 116 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 UBE4BO95155 1302 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 ATRNO75882 1429 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 MMEP08473 750 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 CLTAP09496 248 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 ADORA2BP29275 332 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 RSRC2Q7L4I2 434 aaKnown RBP13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 SRRM1Q8IYB3 904 aaKnown RBP13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 CCDC97Q96F63 343 aaPredicted RBP13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 TAF1DQ9H5J8 278 aaPredicted RBP13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 LRRC4Q9HBW1 653 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 EXOC1LA0A1B0GW35 172 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 PRPSAP2O60256 369 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 CYP2B6P20813 491 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 ALDH3A1P30838 453 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 GABPAQ06546 454 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 TMEM119Q4V9L6 283 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 GLRA4Q5JXX5 417 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 KIF12Q96FN5 646 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 ZBTB45Q96K62 511 aaPredicted RBP13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 C9orf72Q96LT7 481 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 SLC38A10Q9HBR0 1119 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 GINM1Q9NU53 330 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 AGAP1Q9UPQ3 857 aa13.71□□□□□ -0.21
HS6ST1-201ENST00000259241 SLC16A3O15427 465 aaKnown RBP13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 PPFIA4O75335 1185 aa13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 PDGFRBP09619 1106 aa13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 ITKQ08881 620 aa13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 CFAP157Q5JU67 520 aa13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 FAM102AQ5T9C2 384 aaPredicted RBP13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 WDR59Q6PJI9 974 aa13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 RBBP8NLQ8NC74 664 aaPredicted RBP13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 ATG4AQ8WYN0 398 aa13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 SLC35C1Q96A29 364 aa13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 FAM49BQ9NUQ9 324 aa13.71□□□□□ -0.22
HS6ST1-201ENST00000259241 C19orf81C9J6K1 198 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 RARBP10826 455 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 ITGB5P18084 799 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 GEN1Q17RS7 908 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 CBWD6Q4V339 395 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 CBWD3Q5JTY5 395 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 CBWD5Q5RIA9 395 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 TRAPPC11Q7Z392 1133 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 ARHGEF2Q92974 986 aaKnown RBP13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 TATDN2Q93075 761 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 TRIM11Q96F44 468 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 RILPQ96NA2 401 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 HSD3B7Q9H2F3 369 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 SNX9Q9Y5X1 595 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 LRRIQ3A6PVS8 624 aaPredicted RBP13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 MIF4GDA9UHW6 222 aaKnown RBP13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 ITGA4P13612 1032 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 PHKA2P46019 1235 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 NUMBP49757 651 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 NOP14P78316 857 aaKnown RBP13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 AMHR2Q16671 573 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 FAM133BQ5BKY9 247 aaKnown RBP13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 SLC47A2Q86VL8 602 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 TCP11Q8WWU5 503 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 CYP26B1Q9NR63 512 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 GGT7Q9UJ14 662 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 PNMA3Q9UL41 463 aa13.7□□□□□ -0.22
HS6ST1-201ENST00000259241 FAM208AQ9UK61 1670 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms