RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 SNX24Q9Y343 169 aa17.66■□□□□ 0.42
HOXD3-201ENST00000249440 CYP26A1O43174 497 aa17.66■□□□□ 0.42
HOXD3-201ENST00000249440 TMOD1P28289 359 aa17.66■□□□□ 0.42
HOXD3-201ENST00000249440 MAP2K1Q02750 393 aaPredicted RBP17.66■□□□□ 0.42
HOXD3-201ENST00000249440 KRT39Q6A163 491 aa17.66■□□□□ 0.42
HOXD3-201ENST00000249440 RTKN2Q8IZC4 609 aa17.66■□□□□ 0.42
HOXD3-201ENST00000249440 SAMD3Q8N6K7 520 aa17.66■□□□□ 0.42
HOXD3-201ENST00000249440 PRELID2Q8N945 189 aa17.66■□□□□ 0.42
HOXD3-201ENST00000249440 SYTL5Q8TDW5 730 aaPredicted RBP17.66■□□□□ 0.42
HOXD3-201ENST00000249440 CNOT10Q9H9A5 744 aaKnown RBP17.66■□□□□ 0.42
HOXD3-201ENST00000249440 TCEAL9Q9UHQ7 104 aa17.66■□□□□ 0.42
HOXD3-201ENST00000249440 GOLGA8IPA6NC78 632 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 GOLGA8JA6NMD2 632 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 BACH1O14867 736 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 PAEPP09466 180 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 PTGIRP43119 386 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 MARCKSL1P49006 195 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 JAK3P52333 1124 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 MAP3K10Q02779 954 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 SPP2Q13103 211 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 FAM102BQ5T8I3 360 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 CCDC137Q6PK04 289 aaKnown RBP17.65■□□□□ 0.42
HOXD3-201ENST00000249440 SLC47A2Q86VL8 602 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 MTMR14Q8NCE2 650 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 FBXO25Q8TCJ0 367 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 SHC3Q92529 594 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 LPAR1Q92633 364 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 CYFIP2Q96F07 1278 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 KREMEN1Q96MU8 473 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 GPRC5CQ9NQ84 441 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 MTUS1Q9ULD2 1270 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 TRPC6Q9Y210 931 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 ADRB2P07550 413 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 SFNP31947 248 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 BYSLQ13895 437 aaKnown RBP17.65■□□□□ 0.42
HOXD3-201ENST00000249440 XKR9Q5GH70 373 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 DENND2CQ68D51 928 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 TRMT1LQ7Z2T5 733 aaKnown RBP17.65■□□□□ 0.42
HOXD3-201ENST00000249440 CBWD2Q8IUF1 395 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 ZNF564Q8TBZ8 553 aaPredicted RBP17.65■□□□□ 0.42
HOXD3-201ENST00000249440 BBXQ8WY36 941 aaPredicted RBP17.65■□□□□ 0.42
HOXD3-201ENST00000249440 CD101Q93033 1021 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 RUNDC3BQ96NL0 473 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 CNOT8Q9UFF9 292 aaKnown RBP17.65■□□□□ 0.42
HOXD3-201ENST00000249440 MTRF1LQ9UGC7 380 aaKnown RBP17.65■□□□□ 0.42
HOXD3-201ENST00000249440 TBX20Q9UMR3 447 aa17.65■□□□□ 0.42
HOXD3-201ENST00000249440 TMEM150BA6NC51 233 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 CCDC169A6NNP5 214 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 DCDC2CA8MYV0 355 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 WDR64B1ANS9 1081 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 SPOPO43791 374 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 EIF2AK2P19525 551 aaKnown RBP17.64■□□□□ 0.41
HOXD3-201ENST00000249440 CNGA1P29973 690 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 FMO1Q01740 532 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 PGM5Q15124 567 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 UGCGQ16739 394 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 ZDHHC24Q6UX98 284 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 ARMC9Q7Z3E5 817 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 USP37Q86T82 979 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 PARD3BQ8TEW8 1205 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 CCDC127Q96BQ5 260 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 TLCD1Q96CP7 247 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 HVCN1Q96D96 273 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 NUP85Q9BW27 656 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 SLC38A10Q9HBR0 1119 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 RAVER2Q9HCJ3 691 aaKnown RBP17.64■□□□□ 0.41
HOXD3-201ENST00000249440 HOMER2Q9NSB8 354 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 ANKEF1Q9NU02 776 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 UVRAGQ9P2Y5 699 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 CHORDC1Q9UHD1 332 aaPredicted RBP17.64■□□□□ 0.41
HOXD3-201ENST00000249440 GTF3C4Q9UKN8 822 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 COQ4Q9Y3A0 265 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 TULP1O00294 542 aaPredicted RBP17.64■□□□□ 0.41
HOXD3-201ENST00000249440 CYP1A2P05177 515 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 MMEP08473 750 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 PYGMP11217 842 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 CYP11B1P15538 503 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 ADSSP30520 456 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 PDE6CP51160 858 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 RPS6P62753 249 aaKnown RBP17.64■□□□□ 0.41
HOXD3-201ENST00000249440 KRT76Q01546 638 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 DMP1Q13316 513 aaPredicted RBP17.64■□□□□ 0.41
HOXD3-201ENST00000249440 TAAR1Q96RJ0 339 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 EPB41L4BQ9H329 900 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 TMEM8AQ9HCN3 771 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.64■□□□□ 0.41
HOXD3-201ENST00000249440 ZNF277Q9NRM2 450 aaPredicted RBP17.64■□□□□ 0.41
HOXD3-201ENST00000249440 PCDHA3Q9Y5H8 950 aa17.64■□□□□ 0.41
HOXD3-201ENST00000249440 ATMINO43313 823 aaPredicted RBP17.63■□□□□ 0.41
HOXD3-201ENST00000249440 MYCLP12524 364 aaPredicted RBP17.63■□□□□ 0.41
HOXD3-201ENST00000249440 GPC3P51654 580 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 CDR2Q01850 454 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 CROCCP2Q86T23 111 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 MAP4K3Q8IVH8 894 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 TMEM161BQ8NDZ6 487 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 SEMA4DQ92854 862 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 NT5C1BQ96P26 610 aa17.63■□□□□ 0.41
HOXD3-201ENST00000249440 GRHL1Q9NZI5 618 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms