RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 SF3A2Q15428 464 aaKnown RBP13.45□□□□□ -0.26
RFPL3-201ENST00000249007 LIN9Q5TKA1 542 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 TEX2Q8IWB9 1127 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 COLGALT2Q8IYK4 626 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 ZNF687Q8N1G0 1237 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 ITFG1Q8TB96 612 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 LNPKQ9C0E8 428 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 GREB1Q4ZG55 1949 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 WDR81Q562E7 1941 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 IGLV3-22A0A075B6J6 115 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 F8W810 466 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 MAN2B1O00754 1011 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 HNRNPA1P09651 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
RFPL3-201ENST00000249007 RXRAP19793 462 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 CXCL12P48061 93 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 DNM2P50570 870 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 ADCY7P51828 1080 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 NAPAP54920 295 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 CREMQ03060 361 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 AP3B2Q13367 1082 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 USP41Q3LFD5 358 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 MRPL10Q7Z7H8 261 aaKnown RBP13.44□□□□□ -0.26
RFPL3-201ENST00000249007 ZNF410Q86VK4 478 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 NPAS3Q8IXF0 933 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 GPR65Q8IYL9 337 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 FAM160A2Q8N612 972 aaPredicted RBP13.44□□□□□ -0.26
RFPL3-201ENST00000249007 MBOAT7Q96N66 472 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 IL25Q9H293 177 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 AGPAT5Q9NUQ2 364 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 FBXW11Q9UKB1 542 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 LHX6Q9UPM6 363 aa13.44□□□□□ -0.26
RFPL3-201ENST00000249007 TMEM8BA6NDV4 472 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 SRRM3A6NNA2 597 aaPredicted RBP13.43□□□□□ -0.26
RFPL3-201ENST00000249007 WDR64B1ANS9 1081 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 CHURC1-FNTBB4DL54 471 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 E7EWF7 191 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 CCL16O15467 120 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 XYLBO75191 536 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 NR1I2O75469 434 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 ECI2O75521 394 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 FNTBP49356 437 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 SATB1Q01826 763 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 RING1Q06587 406 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 PPM1LQ5SGD2 360 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 STPG1Q5TH74 334 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 WWC2Q6AWC2 1192 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 PSAPL1Q6NUJ1 521 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 TYW1BQ6NUM6 668 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 NFXL1Q6ZNB6 911 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 DNASE1L2Q92874 299 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 LSM14BQ9BX40 385 aaKnown RBP13.43□□□□□ -0.26
RFPL3-201ENST00000249007 RXFP3Q9NSD7 469 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 TAF6LQ9Y6J9 622 aa13.43□□□□□ -0.26
RFPL3-201ENST00000249007 C8AP07357 584 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 NCLP19338 710 aaKnown RBP13.42□□□□□ -0.26
RFPL3-201ENST00000249007 SETQ01105 290 aaPredicted RBP13.42□□□□□ -0.26
RFPL3-201ENST00000249007 DSC1Q08554 894 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 FUT10Q6P4F1 479 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 CEP68Q76N32 757 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 RHPN2Q8IUC4 686 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 ING5Q8WYH8 240 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 NLRP4Q96MN2 994 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 GPR62Q9BZJ7 368 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 LMAN1LQ9HAT1 526 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 KCNH3Q9ULD8 1083 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 CCDC69A6NI79 296 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 CALM1P0DP23 149 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 CALM2P0DP24 149 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 CALM3P0DP25 149 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 HOXA9P31269 272 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 TARBP2Q15633 366 aaKnown RBP13.42□□□□□ -0.26
RFPL3-201ENST00000249007 CCDC6Q16204 474 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 UGCGQ16739 394 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 PABPC1LQ4VXU2 614 aaKnown RBP13.42□□□□□ -0.26
RFPL3-201ENST00000249007 L1TD1Q5T7N2 865 aaKnown RBP13.42□□□□□ -0.26
RFPL3-201ENST00000249007 HEATR6Q6AI08 1181 aaKnown RBP13.42□□□□□ -0.26
RFPL3-201ENST00000249007 PPP1R18Q6NYC8 613 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 TMTC3Q6ZXV5 915 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 LONP2Q86WA8 852 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 MB21D2Q8IYB1 491 aaPredicted RBP13.42□□□□□ -0.26
RFPL3-201ENST00000249007 COLEC11Q9BWP8 271 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 ADAM33Q9BZ11 813 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 PLA2G2FQ9BZM2 168 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 UBN1Q9NPG3 1134 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 DISC1Q9NRI5 854 aa13.42□□□□□ -0.26
RFPL3-201ENST00000249007 SUCLA2Q9P2R7 463 aaPredicted RBP13.42□□□□□ -0.26
RFPL3-201ENST00000249007 ARL5CA6NH57 179 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 ZNF806P0C7X5 589 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 MLH1P40692 756 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 FOXC1Q12948 553 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 MTERF2Q49AM1 385 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 CASC1Q6TDU7 716 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 PRSS55Q6UWB4 352 aaPredicted RBP13.41□□□□□ -0.26
RFPL3-201ENST00000249007 RAB11FIP4Q86YS3 637 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 KSR1Q8IVT5 923 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 FAM3CQ92520 227 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 GAD1Q99259 594 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 TMEM121BQ9BXQ6 578 aaPredicted RBP13.41□□□□□ -0.26
RFPL3-201ENST00000249007 ARRDC1-AS1Q9H2J1 176 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms