RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 C2orf71A6NGG8 1288 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 NRP1O14786 923 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 INPPL1O15357 1258 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 GRIN1Q05586 938 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 RESTQ13127 1097 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 MAPK7Q13164 816 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 EEF1DP3Q658K8 133 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 COLGALT2Q8IYK4 626 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 CALML4Q96GE6 196 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 VN1R3Q9BXE9 311 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 CD320Q9NPF0 282 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 KMT5AQ9NQR1 393 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 CLIC4Q9Y696 253 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 PHLPP2Q6ZVD8 1323 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 TRIP11Q15643 1979 aa23.29■■□□□ 1.32
HCFC1R1-201ENST00000248089 K7ERI5 159 aa23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 PLA2G4BP0C869 781 aa23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 COASYQ13057 564 aa23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 SMAD2Q15796 467 aaKnown RBP23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 ATF7IP2Q5U623 682 aa23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 FAM173BQ6P4H8 233 aa23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 GJD3Q8N144 294 aa23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 SYT2Q8N9I0 419 aaPredicted RBP23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 SMRP1Q8NCR6 262 aa23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 TIPINQ9BVW5 301 aa23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 SNTG2Q9NY99 539 aa23.28■■□□□ 1.32
HCFC1R1-201ENST00000248089 SFI1A8K8P3 1242 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 CTSAP10619 480 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 GUCY2CP25092 1073 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 LONP1P36776 959 aaKnown RBP23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 SLC12A3P55017 1021 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 ZP2Q05996 745 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 GRIK3Q13003 919 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 DHX8Q14562 1220 aaKnown RBP23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 NT5DC1Q5TFE4 455 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 HSCBQ8IWL3 235 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 KCTD17Q8N5Z5 321 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 APOL5Q9BWW9 433 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 MARCH5Q9NX47 278 aa23.27■■□□□ 1.32
HCFC1R1-201ENST00000248089 ZMYM2Q9UBW7 1377 aa23.27■■□□□ 1.31
HCFC1R1-201ENST00000248089 NPHP3-ACAD11A0A0J9YXS1 232 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 SLC16A4O15374 487 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 CLASP2O75122 1294 aaKnown RBP23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 NR1I2O75469 434 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 RECQL4O94761 1208 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 CACNB1Q02641 598 aaPredicted RBP23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 CEBPZQ03701 1054 aaKnown RBP23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 DSC1Q08554 894 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 KARSQ15046 597 aaKnown RBP23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 DCAF4L1Q3SXM0 396 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 ADHFE1Q8IWW8 467 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 GSTCDQ8NEC7 633 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 ARHGAP28Q9P2N2 729 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 PRKAG3Q9UGI9 489 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 MTMR6Q9Y217 621 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 GDAQ9Y2T3 454 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 USP15Q9Y4E8 981 aaPredicted RBP23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 HCFC2Q9Y5Z7 792 aa23.26■■□□□ 1.31
HCFC1R1-201ENST00000248089 F8W810 466 aa23.25■■□□□ 1.31
HCFC1R1-201ENST00000248089 SLC26A4O43511 780 aa23.25■■□□□ 1.31
HCFC1R1-201ENST00000248089 MARCKSP29966 332 aaPredicted RBP23.25■■□□□ 1.31
HCFC1R1-201ENST00000248089 KCNC3Q14003 757 aa23.25■■□□□ 1.31
HCFC1R1-201ENST00000248089 PTPN14Q15678 1187 aa23.25■■□□□ 1.31
HCFC1R1-201ENST00000248089 ANKRD54Q6NXT1 300 aa23.25■■□□□ 1.31
HCFC1R1-201ENST00000248089 CASP10Q92851 521 aa23.25■■□□□ 1.31
HCFC1R1-201ENST00000248089 C17orf75Q9HAS0 396 aa23.25■■□□□ 1.31
HCFC1R1-201ENST00000248089 STK39Q9UEW8 545 aa23.25■■□□□ 1.31
HCFC1R1-201ENST00000248089 CITO14578 2027 aa23.25■■□□□ 1.31
HCFC1R1-201ENST00000248089 C2CD2LO14523 706 aa23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 STX6O43752 255 aa23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 PLCG1P19174 1290 aa23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 GIT2Q14161 759 aa23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 APBB1IPQ7Z5R6 666 aaPredicted RBP23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 GPBP1Q86WP2 473 aa23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 RABGGTAQ92696 567 aa23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 KHSRPQ92945 711 aaKnown RBP eCLIP23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 SNX21Q969T3 373 aa23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 POP1Q99575 1024 aaKnown RBP23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 MRPL4Q9BYD3 311 aaKnown RBP23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 TMEM134Q9H6X4 195 aa23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 KCND2Q9NZV8 630 aa23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 CACNG4Q9UBN1 327 aa23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 RBM19Q9Y4C8 960 aaKnown RBP23.24■■□□□ 1.31
HCFC1R1-201ENST00000248089 URODP06132 367 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 HSP90AA1P07900 732 aaKnown RBP23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 PLS3P13797 630 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 PTPAQ15257 358 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 ZNF568Q3ZCX4 644 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 SPECC1Q5M775 1068 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 TMEM184AQ6ZMB5 413 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 TAS1R3Q7RTX0 852 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 LRRC15Q8TF66 581 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 HERC2P3Q9BVR0 1158 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 COLEC11Q9BWP8 271 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 MRPL17Q9NRX2 175 aaKnown RBP23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 IRAK3Q9Y616 596 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 PLXNA3P51805 1871 aa23.23■■□□□ 1.31
HCFC1R1-201ENST00000248089 CASTOR2A6NHX0 329 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 PTGESO14684 152 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 SOD2P04179 222 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 672.1 ms