RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 FAM71AQ8IYT1 594 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 METTL13Q8N6R0 699 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 EPS8L1Q8TE68 723 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 SHC3Q92529 594 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 OTUD5Q96G74 571 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 HES6Q96HZ4 224 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 RUFY1Q96T51 708 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 ZCCHC17Q9NP64 241 aaKnown RBP16.31■□□□□ 0.2
DDX49-201ENST00000247003 C1orf112Q9NSG2 853 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 RNF181Q9P0P0 153 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 CTTNBP2NLQ9P2B4 639 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 TELO2Q9Y4R8 837 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 A0A0G2JLL6 359 aaPredicted RBP16.31■□□□□ 0.2
DDX49-201ENST00000247003 GOLGA6BA6NDN3 693 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 HADHBP55084 474 aaKnown RBP16.31■□□□□ 0.2
DDX49-201ENST00000247003 GPC5P78333 572 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 MRPS25P82663 173 aaKnown RBP16.31■□□□□ 0.2
DDX49-201ENST00000247003 GUCY2DQ02846 1103 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 SLFN12LQ6IEE8 588 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 PRRT2Q7Z6L0 340 aaPredicted RBP16.31■□□□□ 0.2
DDX49-201ENST00000247003 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 KLHL7Q8IXQ5 586 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 ANKRD13AQ8IZ07 590 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 NAP1L3Q99457 506 aaPredicted RBP16.31■□□□□ 0.2
DDX49-201ENST00000247003 ISCUQ9H1K1 167 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 PORCNQ9H237 461 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 DHX33Q9H6R0 707 aaKnown RBP16.31■□□□□ 0.2
DDX49-201ENST00000247003 EPB41L5Q9HCM4 733 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.29e-13■■■■■ 192.3
DDX49-201ENST00000247003 GDF3Q9NR23 364 aa16.31■□□□□ 0.2
DDX49-201ENST00000247003 KRIT1O00522 736 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 SLC25A27O95847 323 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 LDHAP00338 332 aaKnown RBP16.3■□□□□ 0.2
DDX49-201ENST00000247003 FTLP02792 175 aaPredicted RBP16.3■□□□□ 0.2
DDX49-201ENST00000247003 TGFB3P10600 412 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
DDX49-201ENST00000247003 TAF3Q5VWG9 929 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 RASGEF1CQ8N431 466 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 TAS1R2Q8TE23 839 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 CAVIN3Q969G5 261 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 EXOC4Q96A65 974 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 TMEM143Q96AN5 459 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 ARHGEF26Q96DR7 871 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 FAM167AQ96KS9 214 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 POP1Q99575 1024 aaKnown RBP16.3■□□□□ 0.2
DDX49-201ENST00000247003 HINFPQ9BQA5 517 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 NIFKQ9BYG3 293 aaKnown RBP16.3■□□□□ 0.2
DDX49-201ENST00000247003 TOPORSQ9NS56 1045 aaPredicted RBP16.3■□□□□ 0.2
DDX49-201ENST00000247003 TAS2R14Q9NYV8 317 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 TMEM59LQ9UK28 342 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 FAN1Q9Y2M0 1017 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 SIP14410 1827 aa16.3■□□□□ 0.2
DDX49-201ENST00000247003 K7ERI5 159 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 CXCL11O14625 94 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 IRF6O14896 467 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 CYP26A1O43174 497 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 FARP2O94887 1054 aaPredicted RBP16.29■□□□□ 0.2
DDX49-201ENST00000247003 SGPL1O95470 568 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 GZMAP12544 262 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 EDNRBP24530 442 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 WDR44Q5JSH3 913 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 C11orf63Q6NUN7 778 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 SV2AQ7L0J3 742 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 PALB2Q86YC2 1186 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 IFT81Q8WYA0 676 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 KCNN1Q92952 543 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 KAT5Q92993 513 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 KREMEN1Q96MU8 473 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 AZI2Q9H6S1 392 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
DDX49-201ENST00000247003 PPME1Q9Y570 386 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 LRRC37A2A6NM11 1700 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 IGKV6D-21A0A0A0MT36 114 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 GOLGA6L10A0A0M3HER8 536 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 MIF4GDA9UHW6 222 aaKnown RBP16.29■□□□□ 0.2
DDX49-201ENST00000247003 HSF2BPO75031 334 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 TNNI1P19237 187 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 STAT5BP51692 787 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 GCNT1Q02742 428 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 PSMD6Q15008 389 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 KCNV1Q6PIU1 500 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 TAS1R3Q7RTX0 852 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 NOP9Q86U38 636 aaKnown RBP16.29■□□□□ 0.2
DDX49-201ENST00000247003 UBL4BQ8N7F7 174 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 HELQQ8TDG4 1101 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 SCFD2Q8WU76 684 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.29■□□□□ 0.2
DDX49-201ENST00000247003 CARD9Q9H257 536 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 NOCTQ9UK39 431 aaKnown RBP16.29■□□□□ 0.2
DDX49-201ENST00000247003 ADAM21Q9UKJ8 722 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 AGTPBP1Q9UPW5 1226 aa16.29■□□□□ 0.2
DDX49-201ENST00000247003 SOWAHBA6NEL2 793 aa16.28■□□□□ 0.2
DDX49-201ENST00000247003 RAD51CO43502 376 aa16.28■□□□□ 0.2
DDX49-201ENST00000247003 RNF40O75150 1001 aa16.28■□□□□ 0.2
DDX49-201ENST00000247003 PHACTR2O75167 634 aa16.28■□□□□ 0.2
DDX49-201ENST00000247003 GGPS1O95749 300 aa16.28■□□□□ 0.2
DDX49-201ENST00000247003 PIGRP01833 764 aa16.28■□□□□ 0.2
DDX49-201ENST00000247003 GLI1P08151 1106 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms