RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 HIST1H2AGP0C0S8 130 aaPredicted RBP7.78□□□□□ -1.16
SSR1-201ENST00000244763 HIST1H2ADP20671 130 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 ABCE1P61221 599 aaKnown RBP7.78□□□□□ -1.16
SSR1-201ENST00000244763 NSUN2Q08J23 767 aaKnown RBP eCLIP7.78□□□□□ -1.16
SSR1-201ENST00000244763 LAMC2Q13753 1193 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 UGP2Q16851 508 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 FAM102AQ5T9C2 384 aaPredicted RBP7.78□□□□□ -1.16
SSR1-201ENST00000244763 MFN1Q8IWA4 741 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 APPL2Q8NEU8 664 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 C18orf8Q96DM3 657 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 HIST1H2AHQ96KK5 128 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 HIST1H2AJQ99878 128 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 H2AFJQ9BTM1 129 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 NDFIP2Q9NV92 336 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 SENP1Q9P0U3 644 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 E2F6O75461 281 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 CXCR5P32302 372 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 SF3A3Q12874 501 aaKnown RBP eCLIP7.78□□□□□ -1.16
SSR1-201ENST00000244763 SYT2Q8N9I0 419 aaPredicted RBP7.78□□□□□ -1.16
SSR1-201ENST00000244763 OR9Q1Q8NGQ5 310 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 RUBCNQ92622 972 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 COG4Q9H9E3 785 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 ERAP1Q9NZ08 941 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 A0A1W2PQC6 194 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 SNAP25P60880 206 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 NME3Q13232 169 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 PIGHQ14442 188 aaPredicted RBP7.78□□□□□ -1.16
SSR1-201ENST00000244763 EFTUD2Q15029 972 aaKnown RBP eCLIP7.78□□□□□ -1.165e-7■■■□□ 16.7
SSR1-201ENST00000244763 DGKDQ16760 1214 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 KCTD16Q68DU8 428 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 SARM1Q6SZW1 724 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 PCDHB7Q9Y5E2 793 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 SLC4A7Q9Y6M7 1214 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 MTSS1O43312 755 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 RPS6KA5O75582 802 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 HDLBPQ00341 1268 aaKnown RBP7.78□□□□□ -1.16
SSR1-201ENST00000244763 SGSM1Q2NKQ1 1148 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 EPM2AIP1Q7L775 607 aaPredicted RBP7.78□□□□□ -1.16
SSR1-201ENST00000244763 RNF168Q8IYW5 571 aaPredicted RBP7.78□□□□□ -1.16
SSR1-201ENST00000244763 ZNF512BQ96KM6 892 aaPredicted RBP7.78□□□□□ -1.16
SSR1-201ENST00000244763 GLT1D1Q96MS3 346 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 CATSPERBQ9H7T0 1116 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 C17orf75Q9HAS0 396 aa7.78□□□□□ -1.16
SSR1-201ENST00000244763 APOL1O14791 398 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 RTN2O75298 545 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 FGGP02679 453 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 PNPLA4P41247 253 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 CACNB3P54284 484 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 FCGRTP55899 365 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 EN1Q05925 392 aaPredicted RBP7.77□□□□□ -1.16
SSR1-201ENST00000244763 C2orf54Q08AI8 447 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 IFT88Q13099 833 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 TMEM132BQ14DG7 1078 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 USP17L6PQ6QN14 398 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 DCP1BQ8IZD4 617 aaKnown RBP7.77□□□□□ -1.16
SSR1-201ENST00000244763 TSPAN17Q96FV3 270 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 FAM129AQ9BZQ8 928 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 PRMT7Q9NVM4 692 aaPredicted RBP7.77□□□□□ -1.16
SSR1-201ENST00000244763 SH3BP1Q9Y3L3 701 aa7.77□□□□□ -1.16
SSR1-201ENST00000244763 MUTP22033 750 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 ARL4DP49703 201 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 GRIN1Q05586 938 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 DHX34Q14147 1143 aaKnown RBP7.77□□□□□ -1.17
SSR1-201ENST00000244763 MTFR1Q15390 333 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 ABHD10Q9NUJ1 306 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 FLT1P17948 1338 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 CDC42BPAQ5VT25 1732 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 MFAP3LO75121 409 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 PRKCBP05771 671 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 ARHGEF7Q14155 803 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 ATP11CQ8NB49 1132 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 NSMCE4AQ9NXX6 385 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 TULP4Q9NRJ4 1543 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 PRR36Q9H6K5 1346 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 UBA6A0AVT1 1052 aaPredicted RBP7.77□□□□□ -1.17
SSR1-201ENST00000244763 PRRG1O14668 218 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 SESN3P58005 492 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 THEMIS2Q5TEJ8 643 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 C12orf60Q5U649 245 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 PPHLN1Q8NEY8 458 aaKnown RBP7.77□□□□□ -1.17
SSR1-201ENST00000244763 RAPGEF5Q92565 580 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 TMEM60Q9H2L4 133 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 PPCSQ9HAB8 311 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 SPTLC3Q9NUV7 552 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 SCOCQ9UIL1 159 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 KPNA6O60684 536 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 NR1D1P20393 614 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 TPI1P60174 286 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 ATP2C1P98194 919 aaPredicted RBP7.77□□□□□ -1.17
SSR1-201ENST00000244763 NFIXQ14938 502 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 STX19Q8N4C7 294 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 CXorf38Q8TB03 319 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 SCFD2Q8WU76 684 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 RMDN1Q96DB5 314 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 GTSE1Q9NYZ3 720 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 SCHIP1Q9P0W5 487 aaPredicted RBP7.77□□□□□ -1.17
SSR1-201ENST00000244763 ARHGAP26Q9UNA1 814 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 PRAMEF22A3QJZ6 481 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 CARNS1A5YM72 827 aa7.77□□□□□ -1.17
SSR1-201ENST00000244763 RASA4BC9J798 803 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms