RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 ENOX1Q8TC92 643 aaKnown RBP22.01■■□□□ 1.11
SNRPA-201ENST00000243563 DPF3Q92784 378 aa22.01■■□□□ 1.11
SNRPA-201ENST00000243563 ADAM2Q99965 735 aa22.01■■□□□ 1.11
SNRPA-201ENST00000243563 RBSNQ9H1K0 784 aa22.01■■□□□ 1.11
SNRPA-201ENST00000243563 SAMSN1Q9NSI8 373 aaKnown RBP22.01■■□□□ 1.11
SNRPA-201ENST00000243563 HES2Q9Y543 173 aa22.01■■□□□ 1.11
SNRPA-201ENST00000243563 PDCD11Q14690 1871 aaKnown RBP22■■□□□ 1.11
SNRPA-201ENST00000243563 BICDL2A1A5D9 508 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 CLDN3O15551 220 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 ADRB2P07550 413 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 ACRP10323 421 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 GARTP22102 1010 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 AXLP30530 894 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 MATR3P43243 847 aaKnown RBP eCLIP22■■□□□ 1.11
SNRPA-201ENST00000243563 EPHB4P54760 987 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 WNT7BP56706 349 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 NFIL3Q16649 462 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 CT47A1Q5JQC4 288 aaPredicted RBP22■■□□□ 1.11
SNRPA-201ENST00000243563 SLC27A1Q6PCB7 646 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 C16orf59Q7L2K0 433 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 CSGALNACT2Q8N6G5 542 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 SMG8Q8ND04 991 aaKnown RBP22■■□□□ 1.11
SNRPA-201ENST00000243563 TSG101Q99816 390 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 TCHPQ9BT92 498 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 MSTO1Q9BUK6 570 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 SRRTQ9BXP5 876 aaKnown RBP22■■□□□ 1.11
SNRPA-201ENST00000243563 CXCL16Q9H2A7 254 aa22■■□□□ 1.11
SNRPA-201ENST00000243563 NXF3Q9H4D5 531 aaKnown RBP22■■□□□ 1.11
SNRPA-201ENST00000243563 AGO2Q9UKV8 859 aaKnown RBP22■■□□□ 1.11
SNRPA-201ENST00000243563 MEIS3P2A8K0S8 358 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 AKAP3O75969 853 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 ACOT2P49753 483 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 OSTNP61366 133 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 MYL5Q02045 173 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 ADAM9Q13443 819 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 SPATA1Q5VX52 437 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 TWF2Q6IBS0 349 aaKnown RBP21.99■■□□□ 1.11
SNRPA-201ENST00000243563 CBWD2Q8IUF1 395 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 THNSL1Q8IYQ7 743 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 FAM200AQ8TCP9 573 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 NOC3LQ8WTT2 800 aaKnown RBP21.99■■□□□ 1.11
SNRPA-201ENST00000243563 RNF39Q9H2S5 420 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 FANCLQ9NW38 375 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 NFE2L3Q9Y4A8 694 aa21.99■■□□□ 1.11
SNRPA-201ENST00000243563 FOXR2Q6PJQ5 311 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 SLC9A9Q8IVB4 645 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 RDH13Q8NBN7 331 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 GOLGA5Q8TBA6 731 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 SEPT8Q92599 483 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 FAM213AQ9BRX8 229 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 NAT10Q9H0A0 1025 aaKnown RBP21.98■■□□□ 1.11
SNRPA-201ENST00000243563 CHST12Q9NRB3 414 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 MCF2P10911 925 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 ATF7P17544 494 aaPredicted RBP21.98■■□□□ 1.11
SNRPA-201ENST00000243563 RFC2P35250 354 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 SNRPFP62306 86 aaKnown RBP21.98■■□□□ 1.11
SNRPA-201ENST00000243563 SLFN12LQ6IEE8 588 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 TMEM199Q8N511 208 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 PLEKHO2Q8TD55 490 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 TMEM174Q8WUU8 243 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 FAM84AQ96KN4 292 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 FBXL18Q96ME1 805 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 CGNQ9P2M7 1197 aaKnown RBP21.98■■□□□ 1.11
SNRPA-201ENST00000243563 PRKAG2Q9UGJ0 569 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 IPPQ9Y573 584 aa21.98■■□□□ 1.11
SNRPA-201ENST00000243563 TNRC18O15417 2968 aaPredicted RBP21.97■■□□□ 1.11
SNRPA-201ENST00000243563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.97■■□□□ 1.11
SNRPA-201ENST00000243563 OGTO15294 1046 aa21.97■■□□□ 1.11
SNRPA-201ENST00000243563 PARNO95453 639 aaKnown RBP21.97■■□□□ 1.11
SNRPA-201ENST00000243563 IBSPP21815 317 aaPredicted RBP21.97■■□□□ 1.11
SNRPA-201ENST00000243563 FKBP3Q00688 224 aaKnown RBP21.97■■□□□ 1.11
SNRPA-201ENST00000243563 NCBP1Q09161 790 aaKnown RBP21.97■■□□□ 1.11
SNRPA-201ENST00000243563 CEP135Q66GS9 1140 aa21.97■■□□□ 1.11
SNRPA-201ENST00000243563 XXYLT1Q8NBI6 393 aa21.97■■□□□ 1.11
SNRPA-201ENST00000243563 RGS18Q9NS28 235 aa21.97■■□□□ 1.11
SNRPA-201ENST00000243563 FAM105AQ9NUU6 356 aa21.97■■□□□ 1.11
SNRPA-201ENST00000243563 PCDHB2Q9Y5E7 798 aa21.97■■□□□ 1.11
SNRPA-201ENST00000243563 C9IYK1 514 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 IKBKBO14920 756 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 EXOC3O60645 756 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 CDKAL1Q5VV42 579 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 GPD1LQ8N335 351 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 LPPQ93052 612 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 CCDC51Q96ER9 411 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 APOL6Q9BWW8 343 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 TSPYL2Q9H2G4 693 aaPredicted RBP21.96■■□□□ 1.11
SNRPA-201ENST00000243563 RNF19AQ9NV58 838 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 SNTG2Q9NY99 539 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 CPSF3Q9UKF6 684 aaKnown RBP21.96■■□□□ 1.11
SNRPA-201ENST00000243563 TTC3P53804 2025 aa21.96■■□□□ 1.11
SNRPA-201ENST00000243563 ENPP3O14638 875 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 EXTL3O43909 919 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 STAG3L1P0CL83 205 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 ATP1A3P13637 1013 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 ZSCAN20P17040 1043 aaPredicted RBP21.95■■□□□ 1.1
SNRPA-201ENST00000243563 DCAF4L1Q3SXM0 396 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 CNKSR3Q6P9H4 555 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.95■■□□□ 1.1
SNRPA-201ENST00000243563 TMEM130Q8N3G9 435 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 BORCS6Q96GS4 357 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms