RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 EEF1GP26641 437 aaKnown RBP12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 NT5DC1Q5TFE4 455 aa12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 NAP1L5Q96NT1 182 aaPredicted RBP12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 SNRNP35Q16560 246 aaKnown RBP12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 NTPCRQ9BSD7 190 aaKnown RBP12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 TUBGCP2Q9BSJ2 902 aa12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 ARHGAP28Q9P2N2 729 aa12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 TNFSF13BQ9Y275 285 aa12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 EFCAB14O75071 495 aa12.08□□□□□ -0.47
TNFAIP3-201ENST00000237289 FILIP1Q7Z7B0 1213 aa12.08□□□□□ -0.47
TNFAIP3-201ENST00000237289 DAW1Q8N136 415 aa12.08□□□□□ -0.47
TNFAIP3-201ENST00000237289 NEK11Q8NG66 645 aa12.08□□□□□ -0.47
TNFAIP3-201ENST00000237289 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.47
TNFAIP3-201ENST00000237289 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 FGBP02675 491 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 CASP5P51878 434 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 DBF4BQ8NFT6 615 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 CBWD1Q9BRT8 395 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 UBN1Q9NPG3 1134 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 C1orf112Q9NSG2 853 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 IFNKQ9P0W0 207 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 PUF60Q9UHX1 559 aaKnown RBP12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 ARF4P18085 180 aaPredicted RBP12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 PIK3CAP42336 1068 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 VAMP7P51809 220 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 FANCCQ00597 558 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 FPGSQ05932 587 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 SEZ6Q53EL9 994 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 YME1L1Q96TA2 773 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 ACO2Q99798 780 aaKnown RBP12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 SAMSN1Q9NSI8 373 aaKnown RBP12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 KLK14Q9P0G3 267 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 A0A0G2JMZ2 1700 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 B4GALT5O43286 388 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 STBD1O95210 358 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 IL18RAPO95256 599 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 MXI1P50539 228 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 MYO1EQ12965 1108 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 MAPK7Q13164 816 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 SPC24Q8NBT2 197 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 CPLX3Q8WVH0 158 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 ZBTB45Q96K62 511 aaPredicted RBP12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 MMS19Q96T76 1030 aa12.08□□□□□ -0.48
TNFAIP3-201ENST00000237289 AFPP02771 609 aaKnown RBP12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 MBTD1Q05BQ5 628 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 KCNA1Q09470 495 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 MAN2A1Q16706 1144 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 DUOXA2Q1HG44 320 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 FBXO47Q5MNV8 452 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 FAM126BQ8IXS8 530 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 SEPT11Q9NVA2 429 aaKnown RBP12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 SLC38A7Q9NVC3 462 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 TCHHQ07283 1943 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 RFC2P35250 354 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 MARCH8Q5T0T0 291 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 GBP6Q6ZN66 633 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 ST6GALNAC4Q9H4F1 302 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.07□□□□□ -0.487e-6■■■■■ 74.5
TNFAIP3-201ENST00000237289 SNTG2Q9NY99 539 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 ARHGEF37A1IGU5 675 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 MYL7Q01449 175 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 LRRC26Q2I0M4 334 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 KIAA1841Q6NSI8 718 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 OTOP2Q7RTS6 562 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 CD302Q8IX05 232 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 GLIS3Q8NEA6 775 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 PCDHB2Q9Y5E7 798 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 KAT6AQ92794 2004 aa12.07□□□□□ -0.48
TNFAIP3-201ENST00000237289 AP3M2P53677 418 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 TMEM132DQ14C87 1099 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 ENOX2Q16206 610 aaKnown RBP12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 CENPPQ6IPU0 288 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 CCSAPQ6IQ19 270 aaPredicted RBP12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 LRRC15Q8TF66 581 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 DEF6Q9H4E7 631 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 FRMD3A2A2Y4 597 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 SLC16A3O15427 465 aaKnown RBP12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 KIF4AO95239 1232 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 IQCF3P0C7M6 154 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 CCDC172P0C7W6 258 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 TNNC1P63316 161 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 MYBPC2Q14324 1141 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 RBM43Q6ZSC3 357 aaKnown RBP12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 MKNK1Q9BUB5 465 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 ANKRD63C9JTQ0 380 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 ACRP10323 421 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 CD44P16070 742 aaKnown RBP12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 LRMPQ12912 555 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 SLC24A5Q71RS6 500 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 FRMD5Q7Z6J6 570 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 NFKBIZQ9BYH8 718 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 RBSNQ9H1K0 784 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 SEMA6BQ9H3T3 888 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 FZD8Q9H461 694 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 RSAD1Q9HA92 442 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 FAM105AQ9NUU6 356 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms