RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 TMOD4Q9NZQ9 345 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 ALG6Q9Y672 507 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 RLFQ13129 1914 aa17.45■□□□□ 0.38
UBE3D-201ENST00000237186 SPDYE16A6NNV3 312 aaPredicted RBP17.44■□□□□ 0.38
UBE3D-201ENST00000237186 ATG7O95352 703 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 MAP2K1Q02750 393 aaPredicted RBP17.44■□□□□ 0.38
UBE3D-201ENST00000237186 CFAP58Q5T655 872 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 DCAF12L1Q5VU92 463 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 MIS18BP1Q6P0N0 1132 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 NOP9Q86U38 636 aaKnown RBP17.44■□□□□ 0.38
UBE3D-201ENST00000237186 GPD1LQ8N335 351 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 DNERQ8NFT8 737 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 DDX47Q9H0S4 455 aaKnown RBP17.44■□□□□ 0.38
UBE3D-201ENST00000237186 ATP6V0A4Q9HBG4 840 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 RAB20Q9NX57 234 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 PARP14Q460N5 1801 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 ADGRA3Q8IWK6 1321 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 ZC3H11AO75152 810 aaKnown RBP eCLIP17.44■□□□□ 0.38
UBE3D-201ENST00000237186 ITGA4P13612 1032 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 CLDN10P78369 228 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 PTPROQ16827 1216 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 PRAMEF18Q5VWM3 479 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 ENOSF1Q7L5Y1 443 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 TAS1R3Q7RTX0 852 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 TRMT1LQ7Z2T5 733 aaKnown RBP17.44■□□□□ 0.38
UBE3D-201ENST00000237186 PPM1KQ8N3J5 372 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 CHST13Q8NET6 341 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 PIK3R5Q8WYR1 880 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 POMGNT1Q8WZA1 660 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 CCDC127Q96BQ5 260 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 FAM81BQ96LP2 452 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 RUFY1Q96T51 708 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 KIAA1586Q9HCI6 787 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 STYXL1Q9Y6J8 313 aa17.44■□□□□ 0.38
UBE3D-201ENST00000237186 FGGP02679 453 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 IVLP07476 585 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 SUPT20HL2P0C7V6 817 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 PRKCEQ02156 737 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 SUPT20HL1Q3ZLR7 823 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 EMC10Q5UCC4 262 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 C15orf39Q6ZRI6 1047 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 SV2AQ7L0J3 742 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 TAS1R2Q8TE23 839 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 IFT74Q96LB3 600 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 NT5C1BQ96P26 610 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 FHDC1Q9C0D6 1143 aaPredicted RBP17.43■□□□□ 0.38
UBE3D-201ENST00000237186 CTTNBP2NLQ9P2B4 639 aa17.43■□□□□ 0.38
UBE3D-201ENST00000237186 MAFBQ9Y5Q3 323 aaPredicted RBP17.43■□□□□ 0.38
UBE3D-201ENST00000237186 KIAA0391O15091 583 aaKnown RBP17.42■□□□□ 0.38
UBE3D-201ENST00000237186 CYP26A1O43174 497 aa17.42■□□□□ 0.38
UBE3D-201ENST00000237186 CYP11B1P15538 503 aa17.42■□□□□ 0.38
UBE3D-201ENST00000237186 SOX10P56693 466 aa17.42■□□□□ 0.38
UBE3D-201ENST00000237186 PTENP60484 403 aa17.42■□□□□ 0.38
UBE3D-201ENST00000237186 FMO1Q01740 532 aa17.42■□□□□ 0.38
UBE3D-201ENST00000237186 GCNT1Q02742 428 aa17.42■□□□□ 0.38
UBE3D-201ENST00000237186 TRPM4Q8TD43 1214 aa17.42■□□□□ 0.38
UBE3D-201ENST00000237186 RNPC3Q96LT9 517 aaKnown RBP17.42■□□□□ 0.38
UBE3D-201ENST00000237186 GPRC5DQ9NZD1 345 aa17.42■□□□□ 0.38
UBE3D-201ENST00000237186 CWC15Q9P013 229 aaKnown RBP17.42■□□□□ 0.38
UBE3D-201ENST00000237186 TELO2Q9Y4R8 837 aa17.42■□□□□ 0.38
UBE3D-201ENST00000237186 UTRNP46939 3433 aa17.42■□□□□ 0.38
UBE3D-201ENST00000237186 ZNF233A6NK53 670 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 A6NNZ2 444 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 HNRNPDLO14979 420 aaKnown RBP17.41■□□□□ 0.38
UBE3D-201ENST00000237186 CYP1A2P05177 515 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 GUCY2FP51841 1108 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 CDR2Q01850 454 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 STXBP2Q15833 593 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 TUBB8Q3ZCM7 444 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 TTMPQ5BVD1 217 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 LRIG3Q6UXM1 1119 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 SLC47A2Q86VL8 602 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 DDX1Q92499 740 aaKnown RBP17.41■□□□□ 0.38
UBE3D-201ENST00000237186 ALG3Q92685 438 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 ARL8AQ96BM9 186 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 POP1Q99575 1024 aaKnown RBP17.41■□□□□ 0.38
UBE3D-201ENST00000237186 PLEKHA4Q9H4M7 779 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 SEPT9Q9UHD8 586 aaPredicted RBP17.41■□□□□ 0.38
UBE3D-201ENST00000237186 AMACRQ9UHK6 382 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 GTF3C4Q9UKN8 822 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 FZD1Q9UP38 647 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 EXTL3O43909 919 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 HSPA6P17066 643 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 USP8P40818 1118 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 SKOR1P84550 965 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 SP2Q02086 613 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 LRRC31Q6UY01 552 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBE3D-201ENST00000237186 LRRC45Q96CN5 670 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 POLR3FQ9H1D9 316 aaPredicted RBP17.41■□□□□ 0.38
UBE3D-201ENST00000237186 FAM114A2Q9NRY5 505 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 PHIPQ8WWQ0 1821 aa17.41■□□□□ 0.38
UBE3D-201ENST00000237186 IGKV6D-21A0A0A0MT36 114 aa17.4■□□□□ 0.38
UBE3D-201ENST00000237186 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
UBE3D-201ENST00000237186 PIGRP01833 764 aa17.4■□□□□ 0.38
UBE3D-201ENST00000237186 ATP4AP20648 1035 aa17.4■□□□□ 0.38
UBE3D-201ENST00000237186 PEX5P50542 639 aa17.4■□□□□ 0.38
UBE3D-201ENST00000237186 GPC2Q8N158 579 aa17.4■□□□□ 0.38
UBE3D-201ENST00000237186 UBL4BQ8N7F7 174 aa17.4■□□□□ 0.38
UBE3D-201ENST00000237186 CD101Q93033 1021 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms