RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 RNASELQ05823 741 aaKnown RBP12.32□□□□□ -0.44
CCND1-201ENST00000227507 COASYQ13057 564 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 TRIM74Q86UV6 250 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 TRIM73Q86UV7 250 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 SRRM1Q8IYB3 904 aaKnown RBP12.32□□□□□ -0.44
CCND1-201ENST00000227507 ACER1Q8TDN7 264 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 SLC7A3Q8WY07 619 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 NACC1Q96RE7 527 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 DDX4Q9NQI0 724 aaKnown RBP12.32□□□□□ -0.44
CCND1-201ENST00000227507 NR2E1Q9Y466 385 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 MTMR1Q13613 665 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 PDCD2Q16342 344 aaPredicted RBP12.31□□□□□ -0.44
CCND1-201ENST00000227507 PAF1Q8N7H5 531 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 C4orf32Q8N8J7 132 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 NUDCD1Q96RS6 583 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 MMP19Q99542 508 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 SEPT9Q9UHD8 586 aaPredicted RBP12.31□□□□□ -0.44
CCND1-201ENST00000227507 NAGPAQ9UK23 515 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 ANKRD62A6NC57 917 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 EXOC3O60645 756 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 SMARCA1P28370 1054 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 HNRNPH3P31942 346 aaKnown RBP12.31□□□□□ -0.44
CCND1-201ENST00000227507 COPS2P61201 443 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 GTF3C2Q8WUA4 911 aaPredicted RBP12.31□□□□□ -0.44
CCND1-201ENST00000227507 TMEM120BA0PK00 339 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 GHRP10912 638 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 USP4Q13107 963 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 LAMB3Q13751 1172 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 TPCN2Q8NHX9 752 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 NUDT12Q9BQG2 462 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 SLITRK6Q9H5Y7 841 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 STK17AQ9UEE5 414 aa12.31□□□□□ -0.44
CCND1-201ENST00000227507 TNPO2O14787 897 aaKnown RBP12.3□□□□□ -0.44
CCND1-201ENST00000227507 HOXD10P28358 340 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 ABCD1P33897 745 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 CETN2P41208 172 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 GALCP54803 685 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 IGBP1P78318 339 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 ZBTB16Q05516 673 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 SEL1L2Q5TEA6 688 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 AADACL2Q6P093 401 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 SPATA21Q7Z572 469 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 NAF1Q96HR8 494 aaKnown RBP12.3□□□□□ -0.44
CCND1-201ENST00000227507 TGS1Q96RS0 853 aaKnown RBP12.3□□□□□ -0.44
CCND1-201ENST00000227507 GCNT4Q9P109 453 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 DLGAP2Q9P1A6 1054 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 PCDHGC5Q9Y5F6 944 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 LAMA4Q16363 1823 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 BRAFP15056 766 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 PAX3P23760 479 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 RHBDL3P58872 404 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 KIAA1755Q5JYT7 1200 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 RFX8Q6ZV50 586 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 C18orf8Q96DM3 657 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 ERP44Q9BS26 406 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 PITPNM3Q9BZ71 974 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 GLIS2Q9BZE0 524 aaPredicted RBP12.3□□□□□ -0.44
CCND1-201ENST00000227507 PABPC3Q9H361 631 aaKnown RBP12.3□□□□□ -0.44
CCND1-201ENST00000227507 PSAPP07602 524 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 UCHL3P15374 230 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 ORC2Q13416 577 aaPredicted RBP12.3□□□□□ -0.44
CCND1-201ENST00000227507 TKFCQ3LXA3 575 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 CYP4F22Q6NT55 531 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 ZNF572Q7Z3I7 529 aaPredicted RBP12.3□□□□□ -0.44
CCND1-201ENST00000227507 ARL10Q8N8L6 244 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■■□□□ 14.3
CCND1-201ENST00000227507 ZFATQ9P243 1243 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 SFI1A8K8P3 1242 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 ECE1P42892 770 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 BACE1P56817 501 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 LACTB2Q53H82 288 aaPredicted RBP12.3□□□□□ -0.44
CCND1-201ENST00000227507 TMEM154Q6P9G4 183 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 JAMLQ86YT9 394 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 TMEM237Q96Q45 408 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 RAB3IPQ96QF0 476 aaPredicted RBP12.3□□□□□ -0.44
CCND1-201ENST00000227507 PAPOLBQ9NRJ5 636 aaKnown RBP12.3□□□□□ -0.44
CCND1-201ENST00000227507 TBC1D22BQ9NU19 505 aa12.3□□□□□ -0.44
CCND1-201ENST00000227507 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCND1-201ENST00000227507 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 AFDNP55196 1824 aaKnown RBP12.29□□□□□ -0.44
CCND1-201ENST00000227507 PVALEFA0A1B0GWK0 134 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 STXBP3O00186 592 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 THAP12O43422 761 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 SHMT1P34896 483 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 GRB10Q13322 594 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 SLMAPQ14BN4 828 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 RASIP1Q5U651 963 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 TSHZ1Q6ZSZ6 1077 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.29□□□□□ -0.445e-6■■□□□ 14.5
CCND1-201ENST00000227507 CEP170P1Q96L14 293 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 ZNF570Q96NI8 536 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 MTUS1Q9ULD2 1270 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 TMX2Q9Y320 296 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 LRRIQ4A6NIV6 560 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 AFPP02771 609 aaKnown RBP12.29□□□□□ -0.44
CCND1-201ENST00000227507 TARSP26639 723 aaKnown RBP12.29□□□□□ -0.44
CCND1-201ENST00000227507 ALDH3A1P30838 453 aa12.29□□□□□ -0.44
CCND1-201ENST00000227507 GTF2A2P52657 109 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms